Pseudohalocynthiibacter aestuariivivens: G5B38_13780
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Entry
G5B38_13780 CDS
T06463
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
paed
Pseudohalocynthiibacter aestuariivivens
Pathway
paed03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
paed00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
G5B38_13780 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paed03400
]
G5B38_13780 (nth)
Enzymes [BR:
paed01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
G5B38_13780 (nth)
DNA repair and recombination proteins [BR:
paed03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
G5B38_13780 (nth)
Prokaryotic type
G5B38_13780 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
QIE46505
LinkDB
All DBs
Position
complement(2881491..2882135)
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AA seq
214 aa
AA seq
DB search
MTKQLDYHTIRAIFERFQTAEPEPKGELEHVNVYTLVVAVALSAQATDAGVNKATRALFQ
VADTPQKMLDLGLDGLTEHIKTIGLFRQKAKNVIKLSQILVDEYGGEVPNSRAALQSLPG
VGRKTANVVLNMWWGMPAQAVDTHIFRVGNRTGICVGKDVVAVERAVEDHIPADFQHHAH
HWLILHGRYHCKARKPMCGSCLIRDLCEYEDKNL
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagcaactcgactatcacaccatccgcgccattttcgaacgattccagacggca
gagcccgagccgaaaggcgagttggagcatgtgaacgtctatacgctggtggtagctgtg
gcgctgagtgcccaagcgacagatgccggggtgaacaaggcaacacgcgccttgttccaa
gtggcggacacgccgcagaagatgcttgatctgggcctcgatggtctgaccgagcatatc
aagaccatcggattgtttcgccagaaggcaaagaatgtcatcaagctgagccagatactg
gtagacgaatacggcggcgaagtacccaacagccgtgccgcactgcaatccttacccggc
gtgggtcgcaagactgcgaatgtcgtacttaacatgtggtggggcatgcccgctcaggca
gtcgatacgcatatcttccgcgtcggtaatcgcaccggcatctgcgtcggcaaggacgtg
gttgcagtggaacgcgccgtcgaagaccacataccggcggattttcaacatcacgcgcat
cactggctgatcctgcacgggcgataccactgcaaggcgcgcaaaccgatgtgcggatcg
tgcctgatccgcgatctatgtgaatatgaggacaagaatctatga
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