KEGG   PATHWAY: paeg02010
Entry
paeg02010                   Pathway                                
Name
ABC transporters - Pseudomonas aeruginosa YL84
Description
The ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of a wide variety of substrates such as ions, sugars, lipids, sterols, peptides, proteins, and drugs. The structure of a prokaryotic ABC transporter usually consists of three components; typically two integral membrane proteins each having six transmembrane segments, two peripheral proteins that bind and hydrolyze ATP, and a periplasmic (or lipoprotein) substrate-binding protein. Many of the genes for the three components form operons as in fact observed in many bacterial and archaeal genomes. On the other hand, in a typical eukaryotic ABC transporter, the membrane spanning protein and the ATP-binding protein are fused, forming a multi-domain protein with the membrane-spanning domain (MSD) and the nucleotide-binding domain (NBD).
Class
Environmental Information Processing; Membrane transport
Pathway map
paeg02010  ABC transporters
paeg02010

Other DBs
GO: 0043190 0043191 0043192
TC: 3.A.1
Organism
Pseudomonas aeruginosa YL84 [GN:paeg]
Gene
AI22_02000  [KO:K09811]
AI22_02005  [KO:K09812]
AI22_02260  [KO:K11072] [EC:7.6.2.11]
AI22_02265  [KO:K11071]
AI22_02270  [KO:K11070]
AI22_02275  [KO:K11069]
AI22_02320  [KO:K02424]
AI22_02325  [KO:K10009]
AI22_02380  [KO:K11074]
AI22_02385  [KO:K11075]
AI22_02390  potG; putrescine/spermidine ABC transporter ATP-binding protein [KO:K11076] [EC:7.6.2.16]
AI22_02395  [KO:K11073]
AI22_02400  [KO:K11073]
AI22_02425  [KO:K11073]
AI22_02485  [KO:K23163]
AI22_02490  [KO:K02046]
AI22_02495  cysW; sulfate/thiosulfate transporter permease subunit [KO:K02047]
AI22_02500  [KO:K02045] [EC:7.3.2.3]
AI22_02955  [KO:K15553]
AI22_02960  [KO:K15554]
AI22_02965  [KO:K15555] [EC:7.6.2.14]
AI22_03155  [KO:K07335]
AI22_03195  [KO:K23536]
AI22_03200  [KO:K23535]
AI22_03205  [KO:K23537]
AI22_03760  [KO:K02002]
AI22_04270  [KO:K02073]
AI22_04275  [KO:K02072]
AI22_04280  [KO:K02071]
AI22_04290  znuB; zinc transporter [KO:K09816]
AI22_04295  znuC; zinc transporter [KO:K09817] [EC:7.2.2.20]
AI22_04305  [KO:K09815]
AI22_04540  [KO:K09690]
AI22_04545  [KO:K09691] [EC:7.5.2.14]
AI22_04870  [KO:K02002]
AI22_04920  [KO:K02002]
AI22_04925  [KO:K02001]
AI22_04930  [KO:K02000] [EC:7.6.2.9]
AI22_04990  [KO:K02040]
AI22_04995  [KO:K02037]
AI22_05000  [KO:K02038]
AI22_05005  pstB; phosphate ABC transporter ATP-binding protein [KO:K02036] [EC:7.3.2.1]
AI22_05250  [KO:K12368]
AI22_05770  [KO:K02012]
AI22_05775  [KO:K02011]
AI22_06090  [KO:K23057]
AI22_06095  [KO:K23056]
AI22_06100  [KO:K23055]
AI22_06105  [KO:K23058]
AI22_06370  [KO:K02002]
AI22_06405  [KO:K02002]
AI22_06410  [KO:K02001]
AI22_06415  [KO:K02000] [EC:7.6.2.9]
AI22_06890  [KO:K11085] [EC:7.5.2.6]
AI22_07330  [KO:K01999]
AI22_07335  [KO:K01997]
AI22_07340  [KO:K01998]
AI22_07345  livG; amino acid ABC transporter ATP-binding protein [KO:K01995]
AI22_07350  [KO:K01996]
AI22_07585  [KO:K11963]
AI22_07590  [KO:K11962]
AI22_07595  [KO:K11961]
AI22_07600  [KO:K11960]
AI22_07605  [KO:K11959]
AI22_08525  [KO:K02011]
AI22_08530  [KO:K02012]
AI22_09620  dppF; peptide ABC transporter ATP-binding protein [KO:K12372]
AI22_09625  dppD; peptide ABC transporter ATP-binding protein [KO:K12371]
AI22_09630  [KO:K12370]
AI22_09635  [KO:K12369]
AI22_09640  [KO:K12368]
AI22_09650  [KO:K12368]
AI22_09665  [KO:K12368]
AI22_09670  [KO:K12368]
AI22_09845  [KO:K06861] [EC:7.5.2.5]
AI22_09870  [KO:K02065]
AI22_09875  [KO:K02066]
AI22_09880  [KO:K02067]
AI22_09885  [KO:K07323]
AI22_09890  [KO:K07122]
AI22_11940  [KO:K10022]
AI22_11945  [KO:K10024]
AI22_11950  [KO:K10023]
AI22_11960  [KO:K10025] [EC:7.4.2.1]
AI22_13345  [KO:K01996]
AI22_13350  livG; amino acid ABC transporter ATP-binding protein [KO:K01995]
AI22_13355  livM; leucine/isoleucine/valine transporter permease subunit [KO:K01998]
AI22_13360  [KO:K01997]
AI22_13365  [KO:K01999]
AI22_14280  [KO:K12536]
AI22_14330  [KO:K23064]
AI22_14335  [KO:K23063]
AI22_14340  [KO:K23062]
AI22_14350  [KO:K23061]
AI22_14605  [KO:K11073]
AI22_14930  [KO:K02193] [EC:7.6.2.5]
AI22_14935  [KO:K02194]
AI22_14940  [KO:K02195]
AI22_14945  [KO:K02196]
AI22_15025  [KO:K02048]
AI22_15390  artP; arginine ABC transporter ATP-binding protein [KO:K10004] [EC:7.4.2.1]
AI22_15395  [KO:K10002]
AI22_15400  [KO:K10003]
AI22_15405  [KO:K10001]
AI22_17065  [KO:K13896]
AI22_17070  [KO:K13895]
AI22_17075  [KO:K13894]
AI22_17080  [KO:K13893]
AI22_17085  [KO:K13893]
AI22_17345  [KO:K02017] [EC:7.3.2.5]
AI22_17350  [KO:K02018]
AI22_17355  [KO:K02020]
AI22_17425  [KO:K12541]
AI22_17800  [KO:K10439]
AI22_17805  [KO:K10441] [EC:7.5.2.7]
AI22_17810  [KO:K10440]
AI22_18385  [KO:K13893]
AI22_18390  [KO:K13894]
AI22_18395  [KO:K13895]
AI22_18400  [KO:K13896]
AI22_19705  [KO:K15555] [EC:7.6.2.14]
AI22_19710  [KO:K15554]
AI22_19715  [KO:K15553]
AI22_19770  [KO:K15554]
AI22_19775  [KO:K15555] [EC:7.6.2.14]
AI22_19780  [KO:K15553]
AI22_19925  [KO:K10227]
AI22_19930  [KO:K10228]
AI22_19935  [KO:K10229]
AI22_19940  [KO:K10111] [EC:7.5.2.-]
AI22_19980  [KO:K02073]
AI22_19985  [KO:K02071]
AI22_19990  [KO:K02072]
AI22_20195  ssuB; aliphatic sulfonate ABC transporter ATP-binding protein [KO:K05685] [EC:7.6.2.-]
AI22_20230  [KO:K06160]
AI22_20275  [KO:K09815]
AI22_20280  [KO:K09817] [EC:7.2.2.20]
AI22_20285  [KO:K09816]
AI22_21020  [KO:K02040]
AI22_21260  [KO:K11073]
AI22_21270  [KO:K15553]
AI22_21275  [KO:K15553]
AI22_21280  [KO:K15553]
AI22_21295  [KO:K15553]
AI22_21700  [KO:K09690]
AI22_21870  [KO:K11073]
AI22_23075  [KO:K10014]
AI22_23080  [KO:K10016]
AI22_23085  [KO:K10015]
AI22_23090  [KO:K10017] [EC:7.4.2.1]
AI22_23405  [KO:K09808]
AI22_23410  [KO:K09810] [EC:7.6.2.-]
AI22_23415  [KO:K09808]
AI22_24430  [KO:K10112] [EC:7.5.2.-]
AI22_24435  [KO:K17317]
AI22_24440  [KO:K17316]
AI22_24445  [KO:K17315]
AI22_24560  [KO:K02066]
AI22_24565  [KO:K02065]
AI22_24570  [KO:K02067]
AI22_24645  [KO:K18893]
AI22_24685  [KO:K02002]
AI22_25105  [KO:K02044]
AI22_25110  [KO:K02041] [EC:7.3.2.2]
AI22_25115  [KO:K02042]
AI22_25120  [KO:K02042]
AI22_25360  [KO:K01999]
AI22_25480  [KO:K02042]
AI22_25485  [KO:K02044]
AI22_25490  [KO:K02041] [EC:7.3.2.2]
AI22_25540  [KO:K19340]
AI22_25545  [KO:K19341]
AI22_25605  [KO:K12536]
AI22_25790  ssuB; aliphatic sulfonate ABC transporter ATP-binding protein [KO:K15555] [EC:7.6.2.14]
AI22_25795  ssuC; sulfonate ABC transporter [KO:K15554]
AI22_25805  [KO:K15553]
AI22_25815  [KO:K15555] [EC:7.6.2.14]
AI22_25820  [KO:K15554]
AI22_25825  [KO:K15553]
AI22_26175  [KO:K02010] [EC:7.2.2.7]
AI22_26530  [KO:K11072] [EC:7.6.2.11]
AI22_26535  [KO:K11071]
AI22_26540  potC; putrescine/spermidine ABC transporter permease [KO:K11070]
AI22_26545  [KO:K11069]
AI22_27930  [KO:K11720]
AI22_27935  [KO:K07091]
AI22_28085  [KO:K09969]
AI22_28120  [KO:K10022]
AI22_28220  [KO:K05846]
AI22_28225  [KO:K05845]
AI22_28230  [KO:K05846]
AI22_28235  [KO:K05847] [EC:7.6.2.9]
AI22_28440  [KO:K02073]
AI22_28465  [KO:K15552]
AI22_28470  tauB; taurine ABC transporter ATP-binding protein [KO:K10831] [EC:7.6.2.7]
AI22_28475  tauA; taurine ABC transporter substrate-binding protein [KO:K15551]
AI22_29010  [KO:K06858]
AI22_29510  [KO:K13409]
AI22_29585  [KO:K23188]
AI22_29590  [KO:K23185]
AI22_29595  [KO:K23186]
AI22_29600  [KO:K23187]
Compound
C00009  Orthophosphate
C00025  L-Glutamate
C00031  D-Glucose
C00032  Heme
C00034  Manganese
C00037  Glycine
C00038  Zinc cation
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00051  Glutathione
C00059  Sulfate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00070  Copper
C00077  L-Ornithine
C00079  L-Phenylalanine
C00086  Urea
C00088  Nitrite
C00089  Sucrose
C00093  sn-Glycerol 3-phosphate
C00095  D-Fructose
C00098  Oligopeptide
C00107  Dipeptide
C00114  Choline
C00116  Glycerol
C00120  Biotin
C00121  D-Ribose
C00123  L-Leucine
C00134  Putrescine
C00135  L-Histidine
C00137  myo-Inositol
C00140  N-Acetyl-D-glucosamine
C00148  L-Proline
C00151  L-Amino acid
C00159  D-Mannose
C00175  Cobalt ion
C00181  D-Xylose
C00183  L-Valine
C00185  Cellobiose
C00188  L-Threonine
C00208  Maltose
C00212  Adenosine
C00243  Lactose
C00244  Nitrate
C00245  Taurine
C00255  Riboflavin
C00259  L-Arabinose
C00288  HCO3-
C00291  Nickel
C00294  Inosine
C00299  Uridine
C00315  Spermidine
C00320  Thiosulfate
C00330  Deoxyguanosine
C00333  D-Galacturonate
C00338  Lipopolysaccharide
C00378  Thiamine
C00379  Xylitol
C00387  Guanosine
C00392  Mannitol
C00407  L-Isoleucine
C00430  5-Aminolevulinate
C00470  Pectate
C00475  Cytidine
C00487  Carnitine
C00491  L-Cystine
C00492  Raffinose
C00503  Erythritol
C00526  Deoxyuridine
C00559  Deoxyadenosine
C00719  Betaine
C00794  D-Sorbitol
C00855  D-Methionine
C00865  Phospholipid
C00881  Deoxycytidine
C00919  Choline sulfate
C00973  Cyclomaltodextrin
C01083  alpha,alpha-Trehalose
C01153  Orthophosphoric monoester
C01157  Hydroxyproline
C01177  Inositol 1-phosphate
C01181  4-Trimethylammoniobutanoate
C01279  4-Amino-5-hydroxymethyl-2-methylpyrimidine
C01330  Sodium cation
C01417  Cyanate
C01487  D-Allose
C01606  Phthalate
C01630  Xylobiose
C01667  Bacitracin
C01674  Chitobiose
C01682  Nopaline
C01684  D-Rhamnose
C01762  Xanthosine
C01834  Lipoprotein
C01835  Maltotriose
C01935  Maltodextrin
C01946  Oleandomycin
C02160  Isomaltotriose
C02273  Digalacturonate
C03557  2-Aminoethylphosphonate
C03611  Galactose oligosaccharide
C03619  Methyl beta-D-galactoside
C04114  (E)-4-(Trimethylammonio)but-2-enoate
C04137  Octopine
C05349  Ciprofloxacin
C05402  Melibiose
C05512  Deoxyinosine
C05776  Vitamin B12
C06227  Fe(III)hydroxamate
C06229  Fe(III)dicitrate
C06230  Fe-enterobactin
C06232  Molybdate
C06687  Norfloxacin
C06705  Capsular polysaccharide
C06706  Lipo-oligosaccharide
C06707  Teichoic acid
C06767  Hemine
C07662  Sparfloxacin
C07663  Moxifloxacin
C11612  Polymyxin B
C13768  Colistin sulfate
C14818  Fe2+
C14819  Fe3+
C15521  Alkanesulfonate
C15719  Coelichelin
C16421  AI-2
C16692  Mannopine
C19609  Nickel(2+)
C19872  N-Formyl-4-amino-5-aminomethyl-2-methylpyrimidine
C20570  alpha-1,5-L-Arabinobiose
C20571  alpha-1,5-L-Arabinotriose
C20572  alpha-1,5-L-Arabinotetraose
C20573  Aldotetraouronic acid
C20679  Tungstate
C21066  D-Galactofuranose
C22040  S-Methyl-L-cysteine
G00457  Maltotetraose
Reference
PMID:9799792
  Authors
Tomii K, Kanehisa M.
  Title
A comparative analysis of ABC transporters in complete microbial genomes.
  Journal
Genome Res 8:1048-59 (1998)
DOI:10.1101/gr.8.10.1048
Reference
  Authors
Sperandeo P, Lau FK, Carpentieri A, De Castro C, Molinaro A, Deho G, Silhavy TJ, Polissi A
  Title
Functional analysis of the protein machinery required for transport of lipopolysaccharide to the outer membrane of Escherichia coli.
  Journal
J Bacteriol 190:4460-9 (2008)
DOI:10.1128/JB.00270-08
Reference
  Authors
Ruiz N, Gronenberg LS, Kahne D, Silhavy TJ
  Title
Identification of two inner-membrane proteins required for the transport of lipopolysaccharide to the outer membrane of Escherichia coli.
  Journal
Proc Natl Acad Sci U S A 105:5537-42 (2008)
DOI:10.1073/pnas.0801196105
Reference
  Authors
Omata T, Price GD, Badger MR, Okamura M, Gohta S, Ogawa T
  Title
Identification of an ATP-binding cassette transporter involved in bicarbonate uptake in the cyanobacterium Synechococcus sp. strain PCC 7942.
  Journal
Proc Natl Acad Sci U S A 96:13571-6 (1999)
DOI:10.1073/pnas.96.23.13571
Reference
  Authors
Quintero MJ, Montesinos ML, Herrero A, Flores E
  Title
Identification of genes encoding amino acid permeases by inactivation of selected ORFs from the Synechocystis genomic sequence.
  Journal
Genome Res 11:2034-40 (2001)
DOI:10.1101/gr.196301
Reference
  Authors
Picossi S, Montesinos ML, Pernil R, Lichtle C, Herrero A, Flores E
  Title
ABC-type neutral amino acid permease N-I is required for optimal diazotrophic growth and is repressed in the heterocysts of Anabaena sp. strain PCC 7120.
  Journal
Mol Microbiol 57:1582-92 (2005)
DOI:10.1111/j.1365-2958.2005.04791.x
Reference
  Authors
Valladares A, Montesinos ML, Herrero A, Flores E.
  Title
An ABC-type, high-affinity urea permease identified in cyanobacteria.
  Journal
Mol Microbiol 43:703-15 (2002)
DOI:10.1046/j.1365-2958.2002.02778.x
Reference
  Authors
Richard-Fogal CL, Frawley ER, Kranz RG
  Title
Topology and function of CcmD in cytochrome c maturation.
  Journal
J Bacteriol 190:3489-93 (2008)
DOI:10.1128/JB.00146-08
Reference
  Authors
Suzuki H, Koyanagi T, Izuka S, Onishi A, Kumagai H
  Title
The yliA, -B, -C, and -D genes of Escherichia coli K-12 encode a novel glutathione importer with an ATP-binding cassette.
  Journal
J Bacteriol 187:5861-7 (2005)
DOI:10.1128/JB.187.17.5861-5867.2005
Reference
  Authors
Novikova M, Metlitskaya A, Datsenko K, Kazakov T, Kazakov A, Wanner B, Severinov K
  Title
The Escherichia coli Yej transporter is required for the uptake of translation inhibitor microcin C.
  Journal
J Bacteriol 189:8361-5 (2007)
DOI:10.1128/JB.01028-07
Reference
  Authors
Tikhonova EB, Devroy VK, Lau SY, Zgurskaya HI
  Title
Reconstitution of the Escherichia coli macrolide transporter: the periplasmic membrane fusion protein MacA stimulates the ATPase activity of MacB.
  Journal
Mol Microbiol 63:895-910 (2007)
DOI:10.1111/j.1365-2958.2006.05549.x
Reference
  Authors
Yamanaka H, Kobayashi H, Takahashi E, Okamoto K
  Title
MacAB is involved in the secretion of Escherichia coli heat-stable enterotoxin II.
  Journal
J Bacteriol 190:7693-8 (2008)
DOI:10.1128/JB.00853-08
KO pathway
ko02010   

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