Pasteurella aerogenes: NCTC13378_01431
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Entry
NCTC13378_01431 CDS
T05989
Symbol
rumB
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumB
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
paet
Pasteurella aerogenes
Brite
KEGG Orthology (KO) [BR:
paet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
paet03009
]
NCTC13378_01431 (rumB)
Enzymes [BR:
paet01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
NCTC13378_01431 (rumB)
Ribosome biogenesis [BR:
paet03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
NCTC13378_01431 (rumB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
UPF0020
Methyltransf_12
Methyltransf_25
Methyltransf_15
Methyltransf_32
Cons_hypoth95
Methyltransf_11
GFO_IDH_MocA
CUPID
Motif
Other DBs
NCBI-ProteinID:
VEG71643
LinkDB
All DBs
Position
1:complement(1524355..1525530)
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AA seq
391 aa
AA seq
DB search
MQLTVPCSHYQSGECRSCQWLERPYAQQIETKQADLYQLLAPFNSPQVQWDTPYLSPLSH
FRNKAKMVVSGTVERCRLGILKDPDDPQSAVDLTDCPLYPSRFAPVFLQLKDFIARAGLV
PYNVAKQKGELKYVLLSESQINGALMLRFVLRSEQKLPLIRRELAGLLAKLPQLSVVSVN
IQPQHAAILEGEKEIFLTEQCQLEEQFNRIPLFIRPQGFFQTNPTVASALYATAQTWVKT
LPVSHLWDLFCGVGGFGLHCAVALKENTPALKLTGIEISPSAIASATLSAEKLGLASQIE
FRSLDAAQFALTQDQRPDLVIVNPPRRGIGHKLAQFLQNLAPHFILYSSCNAQSMAQDLH
ELTGYQLQKVQLFDMFPHTSHYEVLALLTRI
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgcaactgacggttccttgttcacattatcaatccggcgaatgtcgctcttgccaatgg
ctagagcgaccttatgcacagcaaattgaaaccaaacaagcggatttatatcaattatta
gcgccatttaattcgcctcaagtgcaatgggatacgccttatttatcgcctttaagccat
tttcgcaacaaagcaaaaatggttgtcagcggcacagtagaacgttgtcgtttagggatt
ttaaaggatccggacgatccgcaaagtgcggtggatttaaccgattgcccgctttatccc
tcgcgttttgccccggtgtttttgcagctaaaagattttatcgcacgcgccggtcttgtg
ccttataacgtggcaaaacaaaaaggcgagttaaaatatgtattacttagcgaaagccaa
atcaatggcgcgttgatgctgcgttttgtgttgcgttcagagcaaaaactgcccttaatt
cgacgagaattggcgggattattggcaaaattgccacaattaagtgtggtcagtgtcaat
attcaaccgcaacacgcggcaattttagagggagagaaagaaatttttctcaccgagcaa
tgtcaattagaagaacaatttaaccgcattcctctgtttattcgtccgcaaggttttttc
caaaccaacccgacagtcgcctctgcgttatatgccaccgcgcaaacttgggtgaaaacg
ttgccggtgtctcatttatgggatcttttttgcggcgtgggcggtttcggtttacactgt
gcggtggcattaaaagagaacactccggcgttaaagctcacgggtattgaaatatcgcct
tcggcaattgcgtcggcaactttgtcagcagaaaaactgggcttggcttctcaaattgaa
tttcgctctttggatgccgcacaatttgccctcacacaagatcaacgcccggatttggtg
attgtgaatccgccaagacgtggtattggacacaaattggcacaatttctgcaaaattta
gcaccgcactttattctttactccagctgcaacgcgcaaagtatggcgcaagatctgcac
gaattaaccggttatcaattacaaaaagtgcaattattcgatatgtttccgcatacatca
cattacgaagtgttagcactattaacacgaatttga
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