Pseudoalteromonas agarivorans: PAGA_a3403
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Entry
PAGA_a3403 CDS
T06137
Symbol
mdh
Name
(GenBank) malate dehydrogenase
KO
K00024
malate dehydrogenase [EC:
1.1.1.37
]
Organism
paga
Pseudoalteromonas agarivorans
Pathway
paga00020
Citrate cycle (TCA cycle)
paga00270
Cysteine and methionine metabolism
paga00620
Pyruvate metabolism
paga00630
Glyoxylate and dicarboxylate metabolism
paga00680
Methane metabolism
paga00710
Carbon fixation by Calvin cycle
paga00720
Other carbon fixation pathways
paga01100
Metabolic pathways
paga01110
Biosynthesis of secondary metabolites
paga01120
Microbial metabolism in diverse environments
paga01200
Carbon metabolism
Module
paga_M00009
Citrate cycle (TCA cycle, Krebs cycle)
paga_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
paga_M00012
Glyoxylate cycle
paga_M00168
CAM (Crassulacean acid metabolism), dark
paga_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
paga00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
PAGA_a3403 (mdh)
00620 Pyruvate metabolism
PAGA_a3403 (mdh)
00630 Glyoxylate and dicarboxylate metabolism
PAGA_a3403 (mdh)
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
PAGA_a3403 (mdh)
00720 Other carbon fixation pathways
PAGA_a3403 (mdh)
00680 Methane metabolism
PAGA_a3403 (mdh)
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
PAGA_a3403 (mdh)
Enzymes [BR:
paga01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 malate dehydrogenase
PAGA_a3403 (mdh)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldh_1_C
Ldh_1_N
Semialdhyde_dh
Motif
Other DBs
NCBI-ProteinID:
ATC83545
LinkDB
All DBs
Position
I:complement(3209760..3210692)
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AA seq
310 aa
AA seq
DB search
MKVAVLGAAGGIGQALSLLLKTGLPAGSELSLYDVAPVVPGVAVDLSHIPTDVKVAGFGA
DDLNKALEGCDIVLIPAGMPRKPGMDRADLFNVNAGIIKTLAEGIVASCPKALVGVITNP
VNGTVPIVAEVFKKAGTYDAKRVFGITTLDVIRSEAFVAELKGVDVATVKVPVIGGHSGT
TILPLLSQVEGVSFTEEEVATLTPRIQNAGTEVVNAKAGGGSATLSMGAAAARFCMSLVK
GLQGEDVVDYAYVAVENGDAEYFAHPVRLGTNGVEEILSYGELSAFEEKAKNDMLETLKK
DIKEGVDFMA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttgctgtattaggtgctgcaggcggtatcggtcaagcgttgtctttattatta
aaaacaggcttaccagctggttctgaattatcactttacgatgttgcaccagttgtacca
ggtgttgcggttgacctatctcacatccctacagatgttaaagtagcaggttttggcgca
gacgatttaaataaagcgcttgaagggtgtgatatcgtacttatcccagcgggtatgcca
cgtaaaccaggtatggatcgtgcggatttatttaacgtaaacgcaggtatcatcaaaaca
ttagcagaaggcattgtagctagctgtcctaaagcgttagtgggtgttatcactaaccca
gtaaacggcactgtaccaattgttgctgaagtattcaaaaaagcaggtacttacgacgct
aagcgcgtatttggtatcactacgcttgacgtaattcgttcagaagcatttgttgctgag
cttaaaggcgtagacgtagcaaccgttaaagtaccagtaattggtggccactcaggcaca
accattctacctctactttctcaagttgaaggcgtaagcttcactgaagaagaagtagct
acacttactccacgtatccaaaatgcaggtactgaagtagtaaatgctaaagcgggcggt
ggttcagctacattatctatgggtgctgctgcagcacgtttttgtatgtctttagttaaa
ggcctacaaggtgaagacgtagtagattacgcatacgttgctgttgaaaatggcgatgca
gagtactttgctcacccagtacgtttaggcacaaacggcgtagaagaaattctttcttac
ggcgagctaagcgcatttgaagaaaaagctaaaaacgacatgcttgaaactctgaaaaaa
gacatcaaagaaggtgttgatttcatggcgtaa
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