Pseudomonas agarici: AWM79_16755
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Entry
AWM79_16755 CDS
T11104
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
pagb Pseudomonas agarici
Pathway
pagb00300
Lysine biosynthesis
pagb00550
Peptidoglycan biosynthesis
pagb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pagb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AWM79_16755
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AWM79_16755
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pagb01011
]
AWM79_16755
Enzymes [BR:
pagb01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
AWM79_16755
Peptidoglycan biosynthesis and degradation proteins [BR:
pagb01011
]
Precursor biosynthesis
Amino acid ligase
AWM79_16755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Antitox_RHH
Motif
Other DBs
NCBI-ProteinID:
AMB86858
UniProt:
A0A0X1T466
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All DBs
Position
3805909..3807372
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AA seq
487 aa
AA seq
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MSLSLNKIFPHAGHDLLIRELALDSRKVRAGDLFLAVPGGKVDGRNHIADALQRGAAAVA
YEVEGATVLPITDILLIPVKGLAAQLSDIAGRFYGEPSRQLKLLGVTGTNGKTSVTQLIA
QAMDLLGQHCGIVGTLGTGFYGALQSGLHTTPDPVAIQATLADLKKAGAKAVAMEVSSHG
LHQGRVSAVAFDVAVLTNLSRDHLDYHGTMQAYGAEKAKLFGWTDLGCRVINLDDDFGRQ
LAAQKHESRLITYSLEDSSAYLYCRDARFGDDGVRATLVTPQGEHHLRSTLIGRFNLSNL
LATVGALLGLDYALDEILRVLPQLEGPAGRMQRLGGGARPLVVVDYAHTPDALEKVLLGL
RPHAKGQLHCLFGCGGDRDRGKRALMAQVVERLADSVLVTDDNPRTEDPLGIFEDIRAGF
AAPEAVRFVAGRGLAIAEVIAAAKVDDVIVLAGKGHEDYQEINGERYAFSDLVEALKALQ
AWEAAHA
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgtccttgagtctgaacaagatctttcctcacgccggacacgatctattgattcgcgag
ctggcgctggacagtcgcaaagtgcgtgccggtgatctgttcctggcggtgccgggcggc
aaggtcgatggccgcaaccatatcgccgatgccttgcagcgtggcgcagcggcagttgcc
tatgaagtggaaggcgccaccgtactgccaatcaccgatattttgttgattccggtcaaa
ggcttggcggcacagttgtcggatatcgccgggcggttctacggtgagcctagccgccag
ttgaaactgctgggcgtcaccggaaccaacggcaagaccagtgtgacccaactgattgcc
caagccatggacctgctcggccagcactgtgggatcgtcggtaccttgggcaccggcttc
tatggtgcgctgcagagcggcctgcataccacaccggacccggttgccatacaggcgacc
ctggctgatctgaagaaagccggcgccaaggcagtcgccatggaagtatcctcccacggc
ctgcatcaggggcgcgtcagcgcggtggcgttcgatgtggcggtgctgaccaacctgtcc
cgcgatcatctcgattaccacggcaccatgcaagcctacggtgccgagaaggccaagctg
ttcggttggaccgacctgggctgccgggtgatcaacctcgatgatgatttcggtcgtcag
ttggcggcgcaaaaacacgagtcccggctgatcacctatagcctcgaggacagtagcgcc
tatctatattgccgcgacgcgcggttcggcgacgacggcgtgcgcgccacgctggtgacc
ccgcaaggcgaacaccatctgcgcagtacgctgattggccgtttcaatctgagcaaccta
ctggctacggtgggtgcattgctggggttggattatgcgctggatgagattctgcgggtg
ctgccccagctcgaaggcccggccggtcgcatgcagcgcctggggggcggtgcccgtccc
ctggtggtggttgattatgcccacaccccggatgccctggaaaaagtcctgctgggcttg
cgaccgcatgccaaggggcagttgcattgcctgttcggttgtgggggcgaccgtgatcgc
ggcaagcgtgcgctgatggctcaagtagtcgaacgcctggccgacagtgtgctggtgacc
gacgacaaccctcggaccgaagatcccctgggaatcttcgaggatatccgtgccggcttt
gccgcccccgaagccgttcgcttcgtggccggtcgtggactggccatcgccgaagtgatc
gctgcggccaaggtcgacgatgtgatcgtcctggccggcaagggccatgaggattatcag
gaaatcaatggcgagcgctatgccttctccgatctggtcgaggcattgaaggcgctgcaa
gcctgggaggccgcgcatgcttga
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