Pseudomonas agarici: AWM79_21295 Help Entry AWM79_21295       CDS       T11104                                  Name (GenBank) DNA ligase (NAD(+)) LigA   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism pagb  Pseudomonas agarici Pathway pagb03030   DNA replication pagb03410   Base excision repair pagb03420   Nucleotide excision repair pagb03430   Mismatch repair Brite KEGG Orthology (KO) [BR:pagb00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     AWM79_21295    03410 Base excision repair     AWM79_21295    03420 Nucleotide excision repair     AWM79_21295    03430 Mismatch repair     AWM79_21295  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:pagb03032]     AWM79_21295    03400 DNA repair and recombination proteins [BR:pagb03400]     AWM79_21295 Enzymes [BR:pagb01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      AWM79_21295 DNA replication proteins [BR:pagb03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      AWM79_21295 DNA repair and recombination proteins [BR:pagb03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      AWM79_21295    NER (nucleotide excision repair)     GGR (global genome repair) factors      AWM79_21295    MMR (mismatch excision repair)     DNA ligase      AWM79_21295   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       AWM79_21295 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 HHH_5 BRCT Nlig-Ia DNA_ligase_ZBD PTCB-BRCT Motif Other DBs NCBI-ProteinID:  AMB87686 UniProt:  A0A0X1T6G3 LinkDB All DBs Position 4868006..4870342 Genome browser AA seq 778 aa AA seqDB search MTAAHTRILELRAELNQHNYRYHVLDEPSVPDAEYDRLFRELKALEAEHPELVSADSPTQ RVGSEALSAFTQVRHEIPMLSLGNAFEEIDMREFDRRVSEGLDLPGAAVEYSCEPKLDGL AVSLLYQDGALVRGATRGDGTTGEDISINVRTVRNIPLRLHGSGWPATLEVRGEVFMSKA GFERLNATQLEAGGKTFANPRNAAAGSLRQLDSKITASRPLEFCCYGLGQVSADIADTHI GNLRQLKAWGVPVSRELRLAQGIGDCLDYYSDIGERRNALPYEIDGVVFKVNSLAAQREL GFRAREPRWAIAHKFPAMEELTELLDVEFQVGRTGAVTPVARLKPVKVGGVTVANATLHN MDEVARLGLMIGDTVIIRRAGDVIPQVVQVVTERRPENARAVEIPLTCPVCASHVERTQL IKRSKGRETISEGAVYRCVGRLACGAQLKQAIIHFVSRRAMDIEGLGDKTIEQLVDEKLI ASPADLYTLTDKDIVDLEGFAELSTRNLLEAIANSKQPSLARFIYALGIPDVGEETAKVL ARSLGSLERVMQALPPVLTYLPDVGMEVAHEIHSFFEDEHNRTVIAQLLERGLVLQDQGE LGAEFAASTTLAELIAKLDISSVGPTAAQKLATRFGSVEGIVKADWLDLRQALNEKPANA VREFFEQPGNAEQALAIEAQLRDFGMHWQSEKKAVENLPLTGQTWVLTGSLELMSRDIAK DKLESLGAKVAGSVSAKTHCVVAGPGAGSKLVKANELGLKVLDEEAFGVFLKGHGIKV NT seq 2337 nt NT seq  +upstreamnt  +downstreamnt atgactgctgcccatacccgcattctagagctgcgcgctgagctcaatcagcacaactac cgttaccatgtgctcgacgagccgagcgttccggacgccgaatacgaccggctgttccgc gaactcaaggccctggaagccgaacacccggagctggtcagcgcggattcgccgacccag cgtgttggtagcgaggcattgtcggccttcacccaagtccggcatgaaatcccgatgctg agcttgggcaacgccttcgaagaaatcgatatgcgcgagttcgaccgccgtgtcagcgag ggcctggacctgcccggcgccgcagtcgagtacagctgcgaaccgaaactggacggcctg gcggtcagcttgttgtatcaggacggtgccctggtgcgcggtgcgacccgaggtgacggt accactggcgaagacatcagcattaacgtgcgcaccgtgcgcaatatcccgctcagactc catggcagcggctggccagccaccctcgaagtgcgcggtgaagtgttcatgtccaaggcc ggtttcgagcgcctgaacgccacgcaactggaagccggcggcaagactttcgccaatccc cgcaatgccgcggcgggcagcctgcgccagttggactcgaagatcaccgccagccgtccg ctggagttttgctgctacggactgggccaggtctcggcggacatcgctgacacccatatt ggcaacctccggcaactcaaggcctggggcgtgccggtcagccgtgaactgaggctggcc cagggcatcggtgactgcttggattactacagtgatatcggcgagcgccgcaacgcgctg ccctatgaaatcgacggcgtggtgttcaaggtcaacagcctggccgcccagcgtgaactg ggctttcgcgcccgcgaaccgcgttgggcgattgcccacaaattcccggccatggaagaa ctcaccgaactgctcgatgtggaattccaggtcggccgtaccggcgcggtcaccccggta gcgcgcctgaagccggtcaaggtgggcggcgtcacagtggccaacgcgaccttgcacaac atggatgaagtcgcgcgcctgggcctgatgatcggtgatacggtgatcattcgccgtgcc ggcgacgtgatcccacaagtggtgcaggtcgtcaccgagcgccgcccggaaaatgcccgt gccgtcgaaatcccactgacctgcccggtctgcgcttcccatgtcgagcgcacgcaactg atcaaacgcagcaagggccgtgaaacgatcagcgagggcgcggtatatcgctgtgtcggt cgtttggcctgtggtgcccaactcaagcaggcgattatccacttcgtctcgcggcgggcg atggatatcgaaggtctgggtgacaagaccatcgagcaactggtggatgaaaagctgatc gcctcgccggccgatctctacaccctgacggacaaagatatcgtcgacctcgaaggcttt gccgaactgtcgacgcgtaatctgctggaagccatcgccaacagcaagcagccgagcctg gcgcgatttatctacgccctgggtattcccgatgtgggcgaagagaccgccaaggtcctg gcgcgctcgctgggctcgctggagcgggtcatgcaggcgttgccgccggtactgacctac ctgccggatgtcggtatggaggtggcccatgagatccacagcttctttgaagacgaacac aaccgcacggtgatcgcgcagctattggagcgtgggttggtgttgcaagaccagggtgaa ctgggcgccgagttcgccgccagtactacgctggccgagctgatcgccaagctggacatc agttcggtcggaccgacggcggcgcaaaaactggcgacccggttcggctctgtcgaaggt atcgtcaaggctgactggctggacctgcgccaggcgttgaatgaaaaaccggccaatgcc gtgcgcgaattcttcgagcagccaggaaatgccgagcaggccttggcgatcgaggcacaa ttgcgtgatttcggcatgcactggcagagcgaaaaaaaggctgtcgagaatctgccgctg acgggccagacctgggtgttgaccggttcgctggaattgatgagtcgcgatatcgccaag gacaagctggaaagcctgggggccaaggtcgccgggtccgtctcggccaagacccattgc gtggttgcgggccctggagcgggttccaagctggtgaaagccaacgagctgggactcaag gtgctggatgaagaagcgttcggggtgttcctgaaagggcatggcatcaaggtctga

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