Planktothrix agardhii: NIES204_02340
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Entry
NIES204_02340 CDS
T05658
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
pagh
Planktothrix agardhii
Pathway
pagh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pagh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NIES204_02340 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pagh03400
]
NIES204_02340 (nth)
Enzymes [BR:
pagh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
NIES204_02340 (nth)
DNA repair and recombination proteins [BR:
pagh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NIES204_02340 (nth)
Prokaryotic type
NIES204_02340 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
BBD52976
LinkDB
All DBs
Position
298754..299473
Genome browser
AA seq
239 aa
AA seq
DB search
MVTQKKRNPKQRALEILLRLKRLYPDATCSLNYQTPVQLLVATILSAQCTDERVNQVTPA
LFARFPDAQSLAKADITELETLVRSTGFYRNKARHIQGSCQLLAEKYGGQPPKVMEQLLE
LPGVARKTANVVLAHGYGINMGVTVDTHVKRLSQRLGLTSHNDPIRIERDLMPLIPREDW
ENWSIRLIYHGRAVCTARSPMCYNCELSDLCPSAQGSTVPSAGKKLGFSINNYLQGEQP
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atggtgactcagaaaaagcgtaacccaaaacaacgcgccttggaaattttattacgacta
aaacgcttgtatcccgatgcaacctgtagtttaaattatcaaactccggtgcaattatta
gtcgccacaattctatcggctcaatgcacagatgaacgggtaaatcaagtgactccggct
ctatttgctcggtttcccgacgcccaaagtttagccaaagccgatattacggaactggaa
accctagtcaggtcaacggggttctatcggaacaaagcccgccatatacaaggctcctgt
caactgttggcggaaaaatacgggggacaaccgccaaaagtgatggaacaactcttagaa
ctcccaggggtagctcgtaagaccgctaacgtggtgttagcccatggctatgggattaat
atgggggtgacggtggatacccatgttaaacggctgagtcaacggctaggactgacttcc
cataacgatccaattcggattgagcgggatctaatgcctttgattccccgggaggattgg
gaaaattggtcaattcgcttaatttatcatggtcgggccgtctgtacagcgcgtagtcca
atgtgttataattgcgaattgtctgatttatgcccctctgctcaaggatcaaccgtcccc
agcgcaggaaaaaaacttggctttagcataaataattatttacaaggagaacagccttaa
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