Paucibacter sediminis: PFX98_20290
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Entry
PFX98_20290 CDS
T10150
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
pais Paucibacter sediminis
Pathway
pais03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pais00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PFX98_20290 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pais03400
]
PFX98_20290 (nth)
Enzymes [BR:
pais01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
PFX98_20290 (nth)
DNA repair and recombination proteins [BR:
pais03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PFX98_20290 (nth)
Prokaryotic type
PFX98_20290 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
Ogg-HhH
Motif
Other DBs
NCBI-ProteinID:
WIT11215
UniProt:
A0AA95NBU1
LinkDB
All DBs
Position
4375471..4376142
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AA seq
223 aa
AA seq
DB search
MNSQMIQHFFETLQRANPAPQTELEYASVFELLAAVLLSAQATDVGVNKATRRLFVVANT
PAKMLALGEQGLSEYIRTIGLYRTKAKNLIATCQILLSQHGGRVPRTREALEALPGVGRK
TANVVLNVAFGEATMAVDTHIFRVANRTGLAPGKTPLAVELGLLERIPPAFMVDAHHWLI
LHGRYVCQARKPLCGQCQVASDCDHGRQLAAAAKPHPTMAAAQ
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgaactcgcaaatgattcagcacttcttcgaaacgctgcagcgcgccaaccccgcgcca
cagaccgagctggagtacgccagcgtgttcgagctgctggcggcggtgctgctgtcggcc
caggccaccgatgtgggcgtgaacaaggccacgcgccggctgttcgtggtggccaacacg
ccggccaagatgctggcgctgggcgagcagggtctgagcgagtacatccgcaccatcggc
ctgtaccgcaccaaggccaagaatctgatcgccacctgccagatcctgctgagccagcat
ggcggccgggtgccgcgcacgcgcgaggcgctggaggctctgcccggcgtgggccgcaag
accgccaacgtggtgctcaacgtcgcctttggcgaggccaccatggcggtggacacgcat
atcttccgcgtcgccaaccgcaccggcctggcgccgggcaagacaccgctggcggtggaa
ctgggcctgctcgaacgcattccaccggccttcatggtggacgcgcaccactggctgatc
ctgcatggacgctatgtctgccaggcgcgcaagccgctgtgcgggcaatgccaggtggcg
agcgattgcgaccacgggcgccagctcgcggccgctgccaagccccaccctacaatggcg
gccgcccagtag
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