Paucibacter sediminis: PFX98_23210
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Entry
PFX98_23210 CDS
T10150
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
pais Paucibacter sediminis
Pathway
pais01501
beta-Lactam resistance
pais01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pais00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PFX98_23210
01503 Cationic antimicrobial peptide (CAMP) resistance
PFX98_23210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pais03036
]
PFX98_23210
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pais02000
]
PFX98_23210
01504 Antimicrobial resistance genes [BR:
pais01504
]
PFX98_23210
Chromosome and associated proteins [BR:
pais03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
PFX98_23210
Transporters [BR:
pais02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
PFX98_23210
Antimicrobial resistance genes [BR:
pais01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
PFX98_23210
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-barrel_RND_2
BSH_RND
BSH_CzcB
YknX_C
HH_MFP_RND
RND-MFP_C
BSH_CusB
HH_EMRA
BSH_YhbJ
CzcB_C
Beta-barrel_RND
HH_CzcB
BSH_LcnD
Motif
Other DBs
NCBI-ProteinID:
WIT11759
UniProt:
A0AA95NG97
LinkDB
All DBs
Position
complement(5001677..5002837)
Genome browser
AA seq
386 aa
AA seq
DB search
MSLIKKTHTVVALLALAGLSGLAYWWQHRPEGSAAAAIAPKAAGASGPALVEGRAVELLT
LTDDAQAVGSLRARQSVVLKPEVSGRVVKLGFTDGQRVRRGQVLIQLDDALQAAQLQQAE
AQAGIARTQLQRNRELLAQNFVSASVVDQAVAALQVAEAQVALSRAQLGRMQVLAPFDGV
AGIRNVNLGEYVKDGAELVSVEDASSMWVDFRLPERYVPSLRLGQPVELLLDALPGRSFT
AKVEALDTQLDAGGRAMLVRARLDKPGSELRSGLFARVRVVFATRAQALVVPEEALVPLG
GKQYLFKLVDGAGGKQAQRLEARLGLRVPGKVEVLDGFKAGDWVVTAGQSRLTRGEQQAV
KLVDVDKQGGAAANAVNPAAASAASR
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgagcttgatcaagaagacccacaccgttgtagccctgcttgccctggcgggcctgagt
ggcctggcctattggtggcaacaccgccccgagggcagcgcggctgccgccattgcgccc
aaggccgcgggcgccagcggccccgccctggtggagggccgcgccgtcgaactgctgacg
ctcaccgacgacgcccaggcggtgggcagcctgcgcgcgcgccagtcggtggtgctcaag
cccgaggtcagcggccgcgtcgtcaagctcggctttaccgatggccagcgcgtgcgccgg
ggtcaggtcttgatacagctggacgatgccttgcaggccgcgcagttgcagcaggccgag
gcccaggccggcatcgcccgcacccagctgcagcgcaatcgcgagctgctggcgcagaac
ttcgtctccgccagcgtggtggatcaggccgtggcggcgctgcaggtggccgaggcccag
gtggcgctgagccgcgcccagctcggccgcatgcaggtgctggcgccgtttgacggcgtg
gccggcatccgcaatgtcaacctcggcgagtacgtcaaggacggcgccgaactggtgagc
gtggaggacgcctcctcgatgtgggtggacttccgcctgcccgagcgctatgtgcccagc
ttgaggctcggccagccggtggagctcttgctggatgcgctgccgggccgcagcttcacg
gccaaggtcgaggcgctcgatacccagctggatgccggcggccgcgccatgctggtgcgc
gcgcgcctggacaaacccggcagcgagctgcgctcgggcctgttcgcccgcgtgcgcgtg
gtgttcgccacgcgtgcccaggccctggtggtgcccgaggaggcgctggtgccgctgggc
ggcaagcaatatctgttcaagctggtggatggcgcgggcggcaagcaggcgcagcggctg
gaggcgcgcctgggcctgcgcgtgccgggcaaggtcgaggtgctggacggcttcaaggcc
ggcgactgggtggtcaccgccggccagtcgcgcctgacgcgcggcgagcagcaggcggtc
aagctggtcgatgtggacaagcagggcggcgccgccgccaatgccgtgaatccagccgcg
gcctctgcagccagccgctaa
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