Paenibacillus sp. JNUCC32: JNUCC32_16310
Help
Entry
JNUCC32_16310 CDS
T11069
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
pajn Paenibacillus sp. JNUCC32
Pathway
pajn00300
Lysine biosynthesis
pajn00550
Peptidoglycan biosynthesis
pajn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pajn00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
JNUCC32_16310
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
JNUCC32_16310
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pajn01011
]
JNUCC32_16310
Enzymes [BR:
pajn01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
JNUCC32_16310
Peptidoglycan biosynthesis and degradation proteins [BR:
pajn01011
]
Precursor biosynthesis
Amino acid ligase
JNUCC32_16310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
RraA-like
LpxD
DUF1611
Motif
Other DBs
NCBI-ProteinID:
QOT07756
LinkDB
All DBs
Position
complement(3613880..3615364)
Genome browser
AA seq
494 aa
AA seq
DB search
MNLKQLSSVLAAAVIEGSGDVEITGIETDSRQVKPGDLFICLPGHTVDGHQFAAQAADKG
AAALVVERKLEVDLPQVIVKDSRFAMAGLANAFYHQPSSRMKMIGVTGTNGKTTTTYLIE
TIMNDFGLKTGLIGTIQMKYGGQSFPMPRTTPEALELQRYLNDMANAGTECCVMEVSSHA
LEQGRVKGTDFRTAIFTNLTQDHLDYHHTMEEYRGAKGLFFSRLGNAFAKDESARKYAVL
NADDDASAYFAKQTAAEVITYGLGEDADVRASNISITAQGTSFHVDTFRGSADISIRMVG
KFNVYNAMAAIAAALLEGVPLEDIKNSLESVPGVDGRVEVVDEGQPYAVIVDYAHTPDGL
ENVLRTVNEFAEGRVLTVFGCGGDRDRTKRPIMGKIAAKYSDVVLVTSDNPRTEDPELIL
KDIEAGLVEDGVATESYKLIVDRRKAIEKAIEMASPGDVVLIAGKGHETYQLIAGEVLDF
DDRIVAKDAIRGRQ
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgaacttaaagcaattatcatccgtattggccgctgctgttatcgagggatccggagat
gttgaaattacggggatagaaacagactccagacaagtaaaaccgggggatttgttcatt
tgcctgccgggccatacggtggatggacaccagtttgcagcccaggccgccgacaaaggc
gccgcggcgctggtcgttgaacgcaagctggaggttgacctcccgcaggtcatcgtgaaa
gacagccgcttcgcgatggcgggtttggcgaatgccttttatcatcagccgagctcccgc
atgaagatgatcggcgtaaccggtacgaacggcaagacaacgacaacgtatttgatcgag
acgatcatgaacgatttcgggttgaaaaccggattgatcggcacgattcagatgaaatac
ggcggccagtccttcccgatgccgagaacgacgcccgaggcgctggagcttcagcgttac
ttgaacgatatggccaatgcaggcaccgagtgctgcgtgatggaggtatcctcgcatgcg
ctcgaacaggggcgcgtgaagggaacggatttccggacggccatcttcacgaatctgacc
caggaccatttggactatcatcacacgatggaagaataccgcggcgcaaaagggttattt
ttctcccggctgggcaacgcttttgccaaggatgaatccgcgcgcaaatatgccgtcctg
aatgcggatgacgatgcttcggcatatttcgccaagcagaccgcggcggaagtgattacc
tacggtttgggtgaagatgcggatgtgcgggcgagcaatatatcgatcaccgcgcaaggc
acctcgttccatgtggatacgttccgcggcagtgcggacatttcgattcgaatggtaggg
aaattcaacgtatataacgccatggctgcgatcgcggcagcgctcctggaaggtgtgccg
ctcgaagatatcaagaacagcctggagtccgtgcccggagtcgatggccgcgtagaggtc
gtggatgaaggccagccgtatgccgtgatcgtggattatgcccatacgccggacggactt
gaaaatgtgctccgcaccgtcaatgaattcgcggaaggccgggtgctcaccgttttcggc
tgcgggggcgaccgggaccggaccaaacggccgatcatgggtaaaatcgctgcgaaatac
agcgatgttgtattggtaacttccgataatccccgtaccgaggatccggagttgatattg
aaggatatcgaggccggattggttgaggacggtgtggcaaccgaaagctacaagctcatc
gtcgatcgccggaaagcgatcgaaaaggctattgaaatggcaagcccgggcgatgtagta
ttgattgcggggaaaggtcatgagacctatcagctgattgcgggcgaagtgcttgatttt
gacgaccgcatcgtagccaaagacgcgataaggggcagacaatag
DBGET
integrated database retrieval system
