Paenibacillus albus: EJC50_21960
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Entry
EJC50_21960 CDS
T06567
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
palb
Paenibacillus albus
Pathway
palb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
palb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EJC50_21960 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
palb03400
]
EJC50_21960 (nth)
Enzymes [BR:
palb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
EJC50_21960 (nth)
DNA repair and recombination proteins [BR:
palb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
EJC50_21960 (nth)
Prokaryotic type
EJC50_21960 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_8
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AZN43842
UniProt:
A0A3S9ADL7
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All DBs
Position
complement(4800549..4801196)
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AA seq
215 aa
AA seq
DB search
MDHFLRVIGEMFPDAHCELNHRNPFELTIAVLLSAQCTDETVNKVTVDLFQKYQTPADYL
AVPLEELQHDIRRIGLFRNKAMFIQKLCRILIDEHDGEVPEKHEQLTKLPGVGRKTANVV
VSNAFGVPAIAVDTHVERVSKRLGFAKSDDSVLEVEKKLMKLIPRELWTETHHRLIFFGR
YHCKAQNPQCEVCPMAELCKEGKGRMKLALNRKAK
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atggatcattttttgcgtgtcattggcgagatgtttccggatgcccattgtgaactcaat
caccgcaatccgttcgagcttacgatcgctgtcctattgtccgctcagtgtacggatgaa
acagtcaacaaagtaacggtagatctgtttcagaaatatcaaacgccggcggattatttg
gctgtgccgctcgaagagctgcagcatgacataaggcgaataggactattccgcaataaa
gcaatgtttatccagaagttatgccgaatcctaattgatgagcatgacggcgaagtgcca
gagaagcacgagcagttgaccaagctgccgggtgtagggcgcaaaacagctaatgtcgtc
gtttccaatgcgtttggcgtaccagcgattgcagtagatacacatgtcgagcgtgtttcg
aagcgacttggattcgccaaaagcgatgatagcgtgcttgaagtcgagaagaaattgatg
aagcttattccgcgtgaactttggacggagacacatcatcggctaattttcttcggaagg
tatcattgtaaagctcagaatccgcaatgcgaggtttgcccgatggcagaactttgcaaa
gaaggcaaaggacgtatgaaacttgccttaaaccgaaaggctaagtaa
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