Pteropus alecto (black flying fox): 102883377
Help
Entry
102883377 CDS
T02993
Symbol
KDM2B
Name
(RefSeq) lysine-specific demethylase 2B isoform X2
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
pale
Pteropus alecto (black flying fox)
Pathway
pale03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pale00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
102883377 (KDM2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pale03000
]
102883377 (KDM2B)
04121 Ubiquitin system [BR:
pale04121
]
102883377 (KDM2B)
03036 Chromosome and associated proteins [BR:
pale03036
]
102883377 (KDM2B)
Enzymes [BR:
pale01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
102883377 (KDM2B)
Transcription factors [BR:
pale03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
102883377 (KDM2B)
Ubiquitin system [BR:
pale04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
102883377 (KDM2B)
Chromosome and associated proteins [BR:
pale03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
102883377 (KDM2B)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
102883377 (KDM2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JHD
F-box
Cupin_8
JmjC
AppA_SCHIC
Motif
Other DBs
NCBI-GeneID:
102883377
NCBI-ProteinID:
XP_006910072
LinkDB
All DBs
Position
Unknown
AA seq
1310 aa
AA seq
DB search
MEAEKDSGRRLRPIDRQRYDENEDLSDVEEIVSVRGFSLEEKLRSQLYQGDFVHAMEGKD
FNYEYVQREALRVPLVFREKDGLGIKMPDPDFTVRDVKLLVGSRRLVDVMDVNTQKGTEM
SMSQFVRYYETPEAQRDKLYNVISLEFSHTKLEHLVKRPTVVDLVDWVDNMWPQHLKEKQ
MEATNAIAEMKYPKVKKYCLMSVKGCFTDFHIDFGGTSVWYHVFRGGKIFWLIPPTLHNL
ALYEEWVLSGKQSDIFLGDRVEHCQRIELKQGYTFFIPSGWIHAVYTPVDSLVFGGNILH
SFNVPMQLRIYEIEDRTRVQPKFRYPFYYEMCWYVLERYVYCVTQRSYLTQEYQRESMLI
DAPRKPSIDGFSSDSWLEMEEESCEQQPQEEEKEEEEEEEELEEEGADKVPKPPADGPAS
PTSTPSEDQEPPGKKPKAPTMRFLKRTLSDESEESVKSTPATDYPKTPTGSPATEVSAKW
THLTEFELKGLKALVEKLESLPENKKCVPEGIEDPQALLEGVKNVLKEHADDDPSLAITG
VPVVTWPKKTPKNRAVGRPKGKLGPASAVKLAANRTTAGARRRRTRCRKCEACLRTECGE
CHFCKDMKKFGGPGRMKQSCIMRQCIAPVLPHTAVCLVCGEAGKEDTVEEEEGKFNLMLM
ECSICNEIIHPGCLKIKESEGVVNDELPNCWECPKCNHAGKTGKQKRGPGFKYASNLPGS
LLKEQKMNRDNKEGQEPAKRRSECEEAPRRRSDEHPKKVPPDGILRRKSDDVHLRRKRKY
EKPQEPSGRKRVSTLQTSPGSSSHLSPRPPLGSNLSPWWRSSLTYFQQQLKPGKEDKLFR
KKRRSWKNTEDRMALANKPLRRFKQEPEDDLPEAPPKTRESDHSRSSSPTAGPSTEGTDG
PEEKKKVKMRRKRRLPNKELSKELSKELNQEIQKTESSLASENHQPIKSEPESENEEPKR
PLGLCERPHRFSKGLNGTPRELRHQLGPGLRSPPRVISRPPPSVSPPKCIQMERHVIRPP
PISPPPDSLPLDDGAAHVMHREVWMAVFSYLSHQDLCVCMRVCRTWNRWCCDKRLWTRID
LNHCKSITPLMLSGIIRRQPVSLDLSWTNISKKQLSWLINRLPGLRDLVLSGCSWIAVSA
LCSSSCPLLRTLDVQWVEGLKDAQMRDLLSPPTDNRPGQMDNRSKLRNIVELRLAGLDIT
DASLRLIIRHMPLLSKLHLSYCNHVTDQSINLLTAVGTTTRDSLTEINLSDCNKVTDQCL
SFFKRCGNICHIDLRYCKQVTKEGCEQFIAEMSVSVQFGQVEEKLLQKLS
NT seq
3933 nt
NT seq
+upstream
nt +downstream
nt
atggaggcagagaaagactctggaagaagattgcgcccgattgaccgccagagatacgac
gagaacgaggacttgtcggacgtggaggagattgttagcgtccgcggcttcagcctggag
gagaagctgcgcagccagctgtatcagggggacttcgtgcacgccatggagggcaaagat
ttcaactacgagtacgtgcagagagaagcgctcagagttcccctggtatttcgagaaaag
gatggactgggaattaagatgcctgaccctgacttcacagtccgagacgtcaaactccta
gtgggtagccggcggctggtggacgtgatggacgtgaatacccagaagggcaccgagatg
agcatgtcccagttcgtgcggtactatgagacgcctgaggctcagcgggacaagctgtac
aacgtcatcagcctggagttcagccacaccaagttggagcacctggtcaagcgcccgact
gtggtggacctggtggactgggtggacaatatgtggccccagcacttgaaggagaagcag
atggaagccacgaacgccatcgcagagatgaagtaccccaaagtgaagaagtactgtctg
atgagcgtgaaaggttgtttcactgacttccacatcgacttcggaggcacttccgtgtgg
taccatgttttccggggtgggaagatcttttggctgatccctccaaccttgcacaatttg
gcactgtacgaggagtgggtgctgtcaggcaaacagagtgacatcttcctgggagaccgc
gtggagcactgccaaaggattgagctgaaacagggctacacgtttttcatcccttccggc
tggatccatgcggtctacacccccgtagactctctggtgtttggcggaaacatccttcac
agctttaacgtgcccatgcagctgcggatctacgagatcgaagacagaacacgggtgcag
cctaaattccgttaccccttctactatgagatgtgctggtatgtcttggagagatacgtg
tactgtgtgacccagcggtcctacctcactcaggaataccagagagaatcaatgctgatt
gatgccccaagaaagcccagtatagacggcttctcatccgattcctggctggagatggaa
gaggagtcctgtgagcagcagccccaggaggaggagaaggaggaggaggaggaggaggag
gagctcgaggaggaaggcgcagataaggtgcccaagccacccgccgatggccccgcctcg
cccaccagcaccccctctgaggaccaagagccccctgggaagaagcccaaagcgcccacc
atgcggtttctcaaaaggactttgtctgacgagtcggaagagagtgtgaagtccacgccg
gccacagactaccccaagacgcccacaggctcccccgccaccgaggtctctgccaagtgg
acccacctcaccgagtttgaactgaagggcctgaaagctctggtggagaaactcgaatcc
ctcccggaaaacaagaagtgtgtccccgaaggcatcgaggacccccaggcgctcctggag
ggcgtgaagaatgtcctgaaggagcacgcggatgacgaccccagtctcgccatcactggg
gtccctgtggtcacttggccaaagaagactccaaagaaccgggcggtagggcggcccaag
gggaagctgggcccggcctccgcggtgaagttggccgccaaccggacgacggcgggagct
cgccggcgccggacgcgatgccgcaagtgcgaggcctgcctgcggaccgagtgcggagag
tgccacttctgcaaggacatgaagaagttcggcggcccggggcggatgaagcagagctgc
atcatgcggcagtgcatcgcgccagtgctgccccacaccgccgtgtgcctcgtgtgtggc
gaggcggggaaggaggacacagtggaagaggaagagggcaagtttaacctcatgctcatg
gagtgctccatctgcaatgaaatcatccaccctggatgccttaagattaaggagtcagag
ggcgtggtcaacgatgagcttccgaactgctgggagtgtccaaagtgtaaccacgccggc
aagaccgggaaacaaaagcgtggccctggctttaagtacgcctccaacctgcccggctcc
ctgctcaaggagcagaagatgaaccgggacaacaaggaagggcaggagcctgccaagcgg
aggagtgagtgtgaagaggcgccccggcgcaggtcagacgagcaccccaagaaggtgccc
cctgacggcatcctacgccgaaagtcggacgacgtgcacctgaggaggaagcggaaatac
gagaagccccaagagcccagtggacgcaagcgagtctcgacgcttcagacgtcccccggg
tcctcctctcacctctcgccgaggccccctctgggcagcaacctcagcccttggtggaga
tccagtctcacttacttccagcagcagctgaaacctggcaaagaagataagcttttcagg
aaaaagcggcggtcctggaagaacaccgaggaccggatggctctagctaacaagccgctc
cgacgcttcaagcaagagccagaggatgatctgcccgaggcgccccccaagaccagggag
agcgaccattctcgctccagctcccccacagccgggcccagcaccgagggcacggacggc
cccgaggagaagaagaaggtgaagatgcgccggaaacggcggctccccaacaaggagctg
agcaaggagctgagcaaggagctcaaccaggagatccagaagacggagagcagcctggca
agcgagaaccaccagcccatcaagtcggagcccgagagtgagaacgaggagcccaagcgg
cccctgggcctctgcgaacgcccccaccgcttcagcaaggggctcaacggcaccccccgg
gagctgcggcaccagctggggcccggcctgcgcagcccaccccgagtcatctcccggccc
cctccctccgtgtccccacccaagtgcatccagatggagcgacatgtgatccggccgccg
cccatcagccccccacccgactcgttgcccctggatgatggggcagcgcacgtcatgcac
agggaggtgtggatggccgtcttcagctacctcagccaccaagacctgtgcgtctgcatg
cgggtttgcaggacctggaaccgctggtgctgcgataagcggttatggacccgcatcgac
ctgaaccactgcaagtccatcacgcccctgatgctgagcggcatcatccggcgacagcct
gtctctctggacctcagctggaccaatatctccaagaaacagctgagctggcttatcaac
cggttgcctgggctccgagacttggtgctgtcgggctgctcgtggatcgcggtctcagcc
ctctgtagctccagttgtccgttgctccggaccctggatgtccagtgggtagaagggcta
aaggatgcccagatgcgggacctcctgtccccgcccacggataacaggccaggtcagatg
gacaatcggagcaagctccggaacattgtggagctgcgtctagcaggcctggacatcacg
gacgcctccctgcggctcatcatccgccacatgcccttgctgtccaagctccaccttagt
tactgtaaccatgttactgaccagtccatcaacctgctcactgctgtaggcaccaccacc
cgagactccttaactgaaatcaacctgtcagactgtaataaggttactgaccagtgcctg
tccttcttcaaacgctgtggaaatatctgtcatattgacctgaggtactgcaagcaagtc
accaaggagggctgtgagcagttcatagccgaaatgtctgtgagtgtccagtttgggcaa
gtggaagaaaaactcctgcaaaaactgagttag
DBGET
integrated database retrieval system
