Pteropus alecto (black flying fox): 102897676
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Entry
102897676 CDS
T02993
Symbol
SCN4A
Name
(RefSeq) sodium channel protein type 4 subunit alpha
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
pale
Pteropus alecto (black flying fox)
Brite
KEGG Orthology (KO) [BR:
pale00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pale04040
]
102897676 (SCN4A)
Ion channels [BR:
pale04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
102897676 (SCN4A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQ
Motif
Other DBs
NCBI-GeneID:
102897676
NCBI-ProteinID:
XP_006912370
LinkDB
All DBs
Position
Unknown
AA seq
1821 aa
AA seq
DB search
MARPSLPTVVPLGPQSLRPFTRESLAAIEQRVVEEEARQQRNKQMEIEEPERKPRSDLEA
GKNLPLIYGDPPPEVIGIPLEDLDPYYSDKKTFIVLNKGKAIFRFSATPALYMLSPFSII
RRGAIKVLIHSLFSMFIMITILTNCVFMTMSEPPPWSKNVEYTFTGIYTFESLIKMLARG
FCIDNFTFLRDPWNWLDFSVIMMAYLTEFVDLGNISALRTFRVLRALKTITVIPGLKTIV
GALIQSVKKLSDVMILTVFCLSVFALVGLQLFMGNLRQKCVRWPPPFNDTNATWYGSDTW
NGSDTWNGNDTWNGQESKASNYTFDWDAYINDEGNFYFLEGAMDALLCGNSSDAGHCPEG
YECIKTGRNPNYGYTSYDTFSWAFLALFRLMTQDYWENLFQLTLRAAGKTYMIFFVVIIF
LGSFYLINLILAVVAMAYAEQNEATLAEDQEKEEEFQQMLEKFKKQQEELEKAKAAHALE
DAEADGDPAHGKDCNGSLDTLPGEKGPPRQSCSADSGISDAMEELEEAQKKCPPWWYKCS
HKVLIWNCCTPWVKFKNIVHLIVMDPFVDLGITICIVLNTLFMAMEHYPMTEHFDQVLSV
GNLVFTGIFTAEMVLKLIAMDPYEYFQQGWNVFDSIIVTLSLVELGLANVQGLSVLRSFR
LLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCK
ISSDCSLPRWHMHDFFHSFLIVFRILCGEWIETMWDCMEVAGQPMCLTVFLMVMVIGNLV
VLNLFLALLLSSFSADSLAASDEDGEMNNLQIAIERIKWGIGFVKTFLLGLLHGKILSPK
EIMLKIGGPGGAEKSGPEDEKEPPPEEGDEDLKKDNSILNHVGLADGPPPSIELDHLNFI
NNPYLTIHVPIASEESDLEMPTEEETDTFSEPEDVKKPPRPLDANSSVCSTADYKPPEED
PEEQAEENPEGEQPEECFTEACVQRCPFLYVDISQGRGKTWWTLRRACFKIVEHNWFETF
IVFMILLSSGALAFEDIYIEQRRVIRTILEYADKIFTYIFILEMLLKWVAYGFKVYFTNA
WCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVNALLGA
IPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCINTTTSERFDISEVNNKSDCESLMHTG
QVRWLNVKVNYDNVGLGYLSLLQVATFKGWMDIMYAAVDSREKEEQPQYEVNMYMYLYFV
IFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGKDIFMTEEQKKYYNAMKKLGSKKPQKPIP
RPQNKIQGMVYDFVTKQVFDITIMILICLNMVTMMVETDDQSQLKVDILYNINMVFIIIF
TGECMLKMLALRHYYFTVGWNIFDFVVVILSIVGLALSDLIQKYFVSPTLFRVIRLARIG
RVLRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFAYVKKESGIDDM
FNFETFGNSIICLFEITTSAGWDGLLNPILNSGPPDCDPTLENPGSSVKGDCGNPSIGIC
FFCSYIIISFLIVVNMYIAIILENFNVATEESSEPLGEDDFEMFYETWEKFDPDATQFIA
YSRLSDFVDTLQEPLRIAKPNKIKLITLDLPMVPGDKIHCLDILFALTKEVLGDSGEMDA
LKETMEEKFMAANPSKVSYEPITTTLKRKHEEVCAIKIQRAYRRHLLQRSLKQASYMYRH
SQDGSGDGAPEKEGLIATTMSKMYGHENGDSSVQGEGEERGSSGDTGPAMGLTPISPSDT
VLPPSPPPGQTVRPGVKESLV
NT seq
5466 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcccatctctgcccaccgtggtgcctctgggcccccaaagcctgcgccctttc
acccgggagtccctggcagccatagaacagcgggtggtggaggaggaggcccggcagcag
aggaacaagcagatggagatcgaggagcctgagaggaagccgcgaagtgacctggaggct
ggcaagaacctgccccttatctacggggacccaccaccagaggtcatcggcatccccctg
gaggacctggacccctactacagtgacaagaagaccttcatcgtgctcaacaagggcaag
gccattttccgcttctcggccacacccgccctctacatgctgagccccttcagcatcatc
agacgaggcgccatcaaggtgctcatccactcgctgttcagcatgttcattatgatcacc
attttgaccaactgcgtgttcatgaccatgagcgagcctcctccctggtccaagaacgtg
gagtacaccttcacagggatctatacctttgagtccctcatcaagatgctggcccgaggc
ttctgcatcgacaacttcacattcctccgggacccctggaactggctggacttcagtgtc
atcatgatggcgtacttgacggagttcgtggacctgggcaacatctcagccctgagaacc
tttcgggtgctgcgggccctgaaaaccatcacagtcatcccaggactgaagacgattgtg
ggggccctgatccagtcggtgaaaaagctgtcggatgtgatgatcctcaccgtcttctgc
ctgagcgtcttcgccctggtgggtctgcagctcttcatgggaaacctgcggcaaaagtgt
gtgcgctggcccccgcccttcaacgacaccaacgccacgtggtacggcagtgacacctgg
aacggcagtgacacctggaacggcaatgacacctggaatggccaggagagcaaggccagc
aactatacctttgactgggatgcctacatcaacgacgaagggaacttctatttcctggag
ggcgccatggatgccctgctctgtgggaacagcagtgatgctgggcactgccccgagggt
tacgagtgcataaagactgggcggaaccccaattatggctacaccagctatgacaccttc
agctgggccttcctggctctcttccgcctcatgacacaggactattgggagaacctcttt
cagctgaccctccgagcagccggcaagacctacatgatcttcttcgtggtcatcatcttc
ctgggctccttttacctcatcaatctgatcctggccgtggtggccatggcgtatgctgag
cagaacgaggccaccctggctgaggatcaggagaaagaagaggagtttcagcagatgctg
gagaaattcaaaaagcagcaggaggagctggagaaggccaaggctgcccacgctctagaa
gatgcggaggcagacggtgacccagcccacgggaaggactgcaacggcagcctggacaca
ttgccgggggagaaggggcccccaaggcagagctgcagcgcagacagtggcatctcggat
gctatggaggagctggaagaggcccagaagaagtgccccccgtggtggtacaagtgctcc
cacaaagtgctcatatggaactgctgcaccccatgggtgaagttcaagaacatcgtccac
ctgatagtcatggaccccttcgtggacctgggcatcaccatctgcatcgtgctcaacacc
ctcttcatggccatggaacattaccccatgacagagcactttgaccaagtgctcagcgtg
ggcaacctggtcttcacgggcatcttcacagcggagatggtgctgaagctcatcgccatg
gacccctacgagtacttccagcagggctggaatgtctttgacagcatcattgtcaccctc
agcctggtggaactgggcctggccaacgtgcaggggctgtctgtgcttcgctccttccgg
ctgctgcgggtcttcaaactggccaagtcgtggcccacgctgaacatgctcatcaagatc
atcggcaactcggtgggggcgctgggcaacctgacgctggtgctggccatcatcgtgttc
atcttcgccgtggtgggcatgcagctgttcggcaagagctacaaggagtgtgtgtgcaag
atctcgtcggactgcagcctgccccgctggcacatgcacgacttcttccactccttcctc
atcgtcttccgcatcctgtgtggggagtggatcgagaccatgtgggactgcatggaggtg
gccggccaacccatgtgcctcaccgtcttcctcatggtcatggtcatcggcaacctcgtg
gtcctgaacctcttcttggccctgctgctgagctccttcagcgccgacagcctggcagcc
tcggacgaggacggcgagatgaacaacctgcagatcgcgattgagcgcatcaagtggggc
atcggcttcgtcaagaccttcctgctggggctgctgcacggcaagatcctgagccccaag
gagatcatgctcaagatcggggggcccgggggtgccgagaagagtggccccgaggacgag
aaggagccgccacctgaggagggcgacgaggacctaaagaaggacaatagcatcctgaac
cacgtgggcctggctgacgggcctccccccagcatcgagctggaccacctcaatttcatc
aacaacccctacctgaccatccatgtgcccatcgcctccgaagagtctgacctggagatg
ccgacggaggaggagacggacaccttctcggagcctgaggacgtcaagaagccgcctcgg
cccctcgacgcgaactcctccgtctgtagcacagctgactacaagccccccgaggaggat
cctgaggagcaagccgaggagaaccccgagggggagcagcctgaggagtgcttcactgag
gcctgtgtgcagcgctgccccttcctctacgtggacatctcccagggccgtgggaagacg
tggtggaccctccgcagggcctgtttcaagatcgttgagcacaactggttcgagaccttc
attgtcttcatgatcctgctaagtagtggagccctggccttcgaggacatctacatcgag
cagcggcgtgtcatccgcaccatcctggagtacgctgacaagatcttcacctacatcttc
atcctggagatgctgctcaagtgggtggcctacggcttcaaggtgtacttcaccaacgcc
tggtgctggctcgacttcctcatcgtggacgtctccatcatcagcttggtggccaattgg
ctgggttactcagaactaggacccatcaaatccctgcggactctgcgggcccttcgtccc
ctgagggcgctgtcccgattcgagggcatgagggtggtggtgaatgccctcctgggagcc
atcccctccattatgaatgtgctgctcgtctgcctcatcttctggctcatcttcagcatc
atgggtgtgaacctgtttgccggcaagttctactactgcatcaacaccaccacctcggag
aggtttgacatctctgaggtcaacaacaagtccgactgcgagagcctgatgcacacgggc
caggtccgctggctcaatgtcaaggtcaactatgacaacgtgggtctaggctacctctct
ctcctgcaggtggccaccttcaaaggctggatggacatcatgtatgcagccgtggactcc
cgggagaaggaggagcagccacagtacgaggtgaatatgtacatgtacctctattttgtc
atcttcatcatctttggatccttcttcaccctcaacctcttcatcggtgtcatcatcgac
aacttcaaccagcagaagaagaagtttggagggaaagacatcttcatgactgaggaacag
aagaaatactacaatgccatgaagaagcttggctccaagaagcctcagaagccaattcct
cggcctcagaacaaaatccagggcatggtgtacgactttgtgacgaagcaggtgtttgac
atcacgatcatgatcctcatctgcctcaacatggtcaccatgatggtggagacggatgac
cagagccagctcaaggtggacatcctgtacaacatcaacatggtcttcatcatcatcttc
acgggggagtgcatgctcaagatgcttgccctgcgccattactacttcaccgtcggctgg
aacatcttcgactttgtggttgtcatcttgtcgattgtgggcctcgcgctctccgacctg
atccagaaatactttgtgtcacccacactgttccgtgttatccgcctggcgcggatcggg
cgtgtcctgcggctgatccgcggagccaaaggcatccggacgctgctttttgccctcatg
atgtcactgcccgccctcttcaacatcggcctcctccttttcctggtcatgtttatctac
tccatcttcggcatgtccaactttgcctacgtcaagaaggagtcaggcatcgatgacatg
ttcaactttgagaccttcggcaacagcatcatctgcctcttcgagatcaccacgtcagct
ggctgggacgggctcctgaacccgatcctgaacagcgggccccccgactgtgaccccacg
ctagagaacccgggcagcagtgtcaagggtgactgtggcaacccctccatcggcatctgc
ttcttctgcagctacatcatcatctccttcctcatagtggtcaacatgtacatcgccatc
atcctggagaacttcaatgtggccacggaggagagcagtgagcccctcggcgaggacgac
tttgagatgttctatgagacgtgggagaagttcgaccctgacgccacgcagttcattgcc
tacagccgcctctccgacttcgtggacaccctgcaggaaccgctgaggatcgccaagccc
aacaagatcaagctcatcacactggacctgcccatggtgcctggcgacaagatccactgc
ctggacatcctcttcgctctgacaaaagaggtcttgggagattcgggggagatggacgcc
ctcaaggagaccatggaggagaaattcatggcagccaacccgtccaaagtctcctatgag
cccatcaccaccaccctcaagaggaagcacgaggaggtgtgtgccatcaagatccagagg
gcctaccgccggcacctgctccagcgctctctgaagcaggcgtcctacatgtaccgccac
agccaggacggcagtggggacggggcccccgagaaggaggggctgatcgccaccaccatg
agcaagatgtacggccatgaaaacggggacagcagtgtgcagggcgagggggaggagagg
ggctcatcaggggacactggacctgccatgggtctcacacccatcagcccctcagacacc
gtcctccctccctccccacccccggggcagacagtacgcccaggggtcaaagagtctctg
gtctag
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integrated database retrieval system
