KEGG   Pteropus alecto (black flying fox): 107196052
Entry
107196052         CDS       T02993                                 
Name
(RefSeq) DNA dC->dU-editing enzyme APOBEC-3B
  KO
K18750  C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
Organism
pale  Pteropus alecto (black flying fox)
Pathway
pale03250  Viral life cycle - HIV-1
pale05170  Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:pale00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    107196052
 09160 Human Diseases
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    107196052
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pale03019]
    107196052
Messenger RNA biogenesis [BR:pale03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     107196052
SSDB
Motif
Pfam: APOBEC2 NAD2 NAD1 APOBEC_N APOBEC3 SNAD4 APOBEC_C APOBEC4_like APOBEC4 APOBEC1 dCMP_cyt_deam_1 MafB19-deam AID DAAD BRCA2_TR2
Other DBs
NCBI-GeneID: 107196052
NCBI-ProteinID: XP_024906401
LinkDB
Position
Unknown
AA seq 549 aa
MTPNCKAGWCGEGSGPSPGRWGLCPAVTLRACRIPSPCPPYFIFRFAVRVGPAAQRGLSP
PRGSSAQREGPRDGEKVGVRQRRPTPQRPPTPAAKAGRGWRLSREGWAVTQTRDFPKTKL
CEGNETPELQEMAGLGQACEGCCGQMPEISYPMEGLDPETFFFEFQNLLYAYGRKSSYLC
FQVEREQHSSPVPSDWGVFENQFCGTEPYHAELCFLNWFRAEKLSPYEHYDVTWFLSWSP
CSTCAEEIAIFLSNHKNVRLSIFVSRIYYFWKPAFRQGLQELDHLGVQLDAMSFDDFKYC
WENFVDNQGMPFRCWKKVHRNYKFVLRKLNEILRNMNLLSEKTFNYHFGNQLRVKKPQGR
RRTYLCYKLKLPNETFDKGYFINKKKNHAEIRFINKIRSLNLDQTKSYKITCYITWSPCS
YCAGKLVALVKSCPHLSLQIFTSRLYYHWLWKNQAGLRYLWKINIPVLVMKEPDFADCWD
NFVNHQSRRFKPWEKLTQYSNSTERRLLRILRINRTDLFLAQSSEQDPGLNDLVDAIKRL
FLDAHRPRD
NT seq 1650 nt   +upstreamnt  +downstreamnt
atgacacctaactgcaaagcagggtggtgtggagagggctccggcccctccccagggagg
tggggcctctgtcctgcggtcaccctcagggcctgtcgcatcccctctccctgccctcct
tactttatctttcgctttgcagtaagggtgggtcctgctgcccagaggggcctgtcgcca
ccgagggggagctctgcccagagggagggccccagagatggagagaaggtgggtgtgaga
cagaggaggcccacaccccagagacctccaacccctgctgccaaagcaggaagggggtgg
cgcctcagccgagaaggttgggcagtcactcagacgagggactttcctaaaaccaagctc
tgtgaaggaaacgaaaccccagaactacaagaaatggcaggtctgggacaagcctgtgaa
ggatgctgcggacagatgccggagatcagttacccaatggaaggattagatcctgaaacc
ttcttcttcgaattccaaaacctgctctatgcctatgggcggaagagctcctacctctgc
ttccaggtggagagagagcagcacagctcaccggtgccctctgactggggggtctttgaa
aaccagttctgtgggacggagccctaccacgcagaactctgcttcctgaattggttccgt
gccgagaagctgtctccttatgaacattacgatgtcacctggttcctatcctggagcccc
tgctccacctgtgcagaggagatagccattttcctgagcaatcacaagaacgtcaggctg
agcatctttgtctcccgaatctactacttctggaaaccagcgttccggcagggacttcag
gagctggaccacttaggggtccagctggacgccatgtcctttgacgattttaaatactgt
tgggaaaacttcgtggacaaccagggaatgcccttcaggtgttggaagaaagtgcatcga
aattataagtttgtgttaagaaagcttaacgaaatcctcagaaacatgaatctactatcg
gaaaaaacatttaactaccattttggcaaccagctccgagtcaaaaagccccaaggccgg
aggaggacctacttgtgctacaagctgaagctgcccaatgaaacctttgacaagggctac
tttatcaacaagaaaaagaaccatgcagaaattcgctttatcaacaagatccgctcactg
aacctggaccaaacgaagagctacaaaatcacctgctatatcacctggagcccctgttcg
tactgcgctgggaagctggtggctctcgtcaaaagttgtccccatctgagcctgcagatc
ttcacctcccgcctgtactaccactggttgtggaaaaaccaggcagggctgcgatatctt
tggaaaatcaatattccagtgttggtcatgaaagaaccagactttgctgactgctgggac
aacttcgtgaaccaccagagcaggcgtttcaagccgtgggagaagctgacacaatacagt
aactccacagagagaaggctcctgaggatcctgcggatcaacagaacggacctgttctta
gcacagagctcagaacaggatccagggctgaatgacttagtggatgccatcaaacgtttg
ttcttggatgcccaccgccctcgtgactag

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