Pantoea alfalfae: K6R05_14165
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Entry
K6R05_14165 CDS
T09440
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
palf
Pantoea alfalfae
Pathway
palf01501
beta-Lactam resistance
palf01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
palf00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
K6R05_14165
01503 Cationic antimicrobial peptide (CAMP) resistance
K6R05_14165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
palf03036
]
K6R05_14165
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
palf02000
]
K6R05_14165
01504 Antimicrobial resistance genes [BR:
palf01504
]
K6R05_14165
Chromosome and associated proteins [BR:
palf03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
K6R05_14165
Transporters [BR:
palf02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
K6R05_14165
Antimicrobial resistance genes [BR:
palf01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
K6R05_14165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND
BSH_RND
RND-MFP_C
HH_MFP_RND
YknX_C
BSH_CusB
Beta-barrel_RND_2
HH_CzcB
BSH_CzcB
HH_EMRA
CzcB_C
HH_AAEA_pHBA
Motif
Other DBs
NCBI-ProteinID:
QZX94890
LinkDB
All DBs
Position
2998536..2999729
Genome browser
AA seq
397 aa
AA seq
DB search
MNKIRGLSPLAAVLMLSGSFLLTGCDNNKSEQAAQQPPAVGVVTLKTEPLKISTELPGRT
SAYRVAEVRPQVSGIILKRNFVEGSDVKAGQSLYQIDPATYQAAYDSAKGDLTQAQANAR
IAQLTVKRYKPLLGTKYISQQDYDTAVATAAQNDAAVQVAKANVETARINLAYTKVTSPI
SGRIGKSSVTEGALVQSAQTTALATVQQLDPMYVDVTQSSEDFMRLRSELESGQLKQNDG
KANVTLLMQNGSSYAQTGTLEFSDVTVDETTGSITLRAIVPNPNHTLLPGMFVRARLDEG
INPNAMLVPQQAVTRTPTGQATVMVVGADNKVESRQVTTSQAIGDKWLVTDGVKAGERVI
STGLQRAKPGAQVTPQEVSDDAKAAPDSKPQSDKSSS
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaatcagaggattatcgcctctggcggccgtcctgatgctatcaggcagcttt
ttgttaacaggatgtgacaacaataaatccgaacaagccgcccagcaaccgccagcagtg
ggtgttgtgacacttaaaactgaacccctgaaaatttcgactgaactccctggccgcacc
tcagcatatcgtgtggctgaagtccgtccgcaggtttccggtatcattctgaagcgtaat
tttgttgaaggcagcgatgtcaaagcaggtcagtctctttatcagatcgatccggcgact
tatcaggctgcttacgacagcgctaaaggcgatttgacacaggctcaggcgaatgctcgc
atcgctcagctgaccgtcaagcgctataaaccgctgctcggcaccaaatatatcagtcag
caggattatgacaccgccgttgctactgccgcgcaaaacgatgctgccgtgcaggtggca
aaagccaatgttgaaacggcccgtattaacctggcttacaccaaagtgacctcgcctatc
agtggccgcatcggtaaatcctctgttaccgaaggtgcattggtacaaagcgcacaaacc
accgcgctcgctaccgtgcagcagcttgatccaatgtatgtcgacgtgacccagtcgagc
gaagatttcatgcgcttacgttcagaactggagtcgggtcagctgaagcagaacgatggc
aaagccaacgtgacgctgctgatgcagaacggcagcagctatgcacagaccggtacgctg
gagttctctgacgtgaccgttgatgaaaccaccggttccatcaccctacgcgccattgtc
ccgaacccgaaccacacgctgttaccgggcatgtttgttcgtgcgcgtctggatgagggg
atcaacccgaatgcaatgctggtgccccaacaggcagttacccgcacgccaacgggtcag
gcaaccgtgatggtcgtaggtgcagataacaaagtcgaatcacgtcaggtcaccacctct
caggcgattggcgacaagtggttagtgaccgacggcgttaaagcaggcgaacgtgtgatc
agcaccggactgcagcgtgccaagccaggcgcacaggttactccacaagaagtctcagac
gatgcgaaagcggcacccgattcaaaaccgcagtctgacaagtcatcgtcataa
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