Pantoea alfalfae: K6R05_15540
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Entry
K6R05_15540 CDS
T09440
Symbol
lpxC
Name
(GenBank) UDP-3-O-acyl-N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
palf
Pantoea alfalfae
Pathway
palf00540
Lipopolysaccharide biosynthesis
palf01100
Metabolic pathways
Module
palf_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
palf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
K6R05_15540 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
palf01005
]
K6R05_15540 (lpxC)
Enzymes [BR:
palf01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
K6R05_15540 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
palf01005
]
Lipid A
K6R05_15540 (lpxC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-ProteinID:
QZX95141
LinkDB
All DBs
Position
complement(3288213..3289130)
Genome browser
AA seq
305 aa
AA seq
DB search
MIKQRTLKRIVQATGVGLHTGKKVTLTLRPASANTGVIYRRTDLNPPVDFPADAKYVRDT
MLSTCLVNDEGVRISTVEHLNAALAGLGIDNIIVEVDAPEIPIMDGSAAPFIYLLMDAGI
EQLNSAKKFVRVKQTVRVEEGDKWAEIKPYNGFSLDFTIDFKHPAIDSSSQRYAMNFSAD
AFVRQISRARTFGFMREIEYLQSKGLCLGGSLDCAIGLDDFRVLNEEGLRFEDEFVRHKM
LDAIGDLFMCGHNIIGAFTAFKSGHALNNKLLQAVLAKQEAWEWATFEDEAELPLAFKAP
NLVLA
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaacaaaggacattaaaacgtattgttcaggcgactggtgtcggtttacatacc
ggcaaaaaagtcacactgacattacgccctgcgtcggctaataccggggtcatctatcgt
cgcaccgacttgaatccaccggtagattttccggctgatgcaaaatacgtgcgcgacacc
atgctgagtacctgcctggtgaacgatgaaggcgtgcgtatttcaacggttgaacacctt
aatgccgccctggcgggtctcggtattgacaacattattgttgaagtcgatgcgccagaa
atcccgatcatggatggcagcgcagcaccgtttatctatctgctgatggatgcgggcatc
gagcagctcaacagcgcgaagaaatttgtgcgtgttaagcagaccgtgcgtgtggaagag
ggtgacaaatgggctgagatcaaaccgtacaacggtttctcactcgatttcaccatcgac
ttcaagcacccggctatcgattccagctcacagcgctatgcgatgaacttctctgctgac
gcctttgttcgtcaaatcagccgggcgcgtacatttggctttatgcgtgaaatcgaatat
ctgcagtctaaaggcctgtgcctgggcggtagcttagattgtgcgataggtctggatgat
ttccgcgtactgaatgaagaaggtctgcgttttgaagacgagtttgtccgtcacaaaatg
ctggacgcgattggcgacttgtttatgtgtggtcacaacatcattggcgcattcactgcg
ttcaaatcgggccacgcgctgaacaacaagctgctgcaagcagttctggctaagcaggaa
gcctgggaatgggcaaccttcgaagacgaagccgaactgccgctggcattcaaagcaccg
aatctggttctggcttaa
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