Parasphingopyxis algicola: HFP57_08240
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Entry
HFP57_08240 CDS
T06669
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
palg
Parasphingopyxis algicola
Pathway
palg01501
beta-Lactam resistance
palg01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
palg00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HFP57_08240
01503 Cationic antimicrobial peptide (CAMP) resistance
HFP57_08240
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
palg02000
]
HFP57_08240
01504 Antimicrobial resistance genes [BR:
palg01504
]
HFP57_08240
Transporters [BR:
palg02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
HFP57_08240
Antimicrobial resistance genes [BR:
palg01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HFP57_08240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
QLC25015
LinkDB
All DBs
Position
1666179..1669259
Genome browser
AA seq
1026 aa
AA seq
DB search
MSFRTVSTWAIKNPTPPLVLFLGLMLAGIVSFARLDVNDSPEVDFPAVQVIIAQPGAAPT
ELENQVTQRVEAAVRNISGVNTLSSFVNEGNSRTFIEFTIGTPVDRAVNDVRNAIAQIRG
DLPEGILEPQIVRVEINGGGTIAYFAVENVDMTLEELSWFVDNTVARQLLSIDGMAAVDR
GGGVSREIRVILDPARLQSLGITASQVNAQLRAVNLNAAGGRAEVAGSEQSVRVLGNAET
AYELGQTDIALGGGRTVKLADIAEVRDLYGEQRSLSKMNNRQVLSFGIERAKGASDVTVY
DEAERVLAEIEENNPGVQFTRLFTTVEYTRENYESAMMALIEGAILAVIVVWFFLRDWRA
TLISAIAIPLSAIPTFWFMDLFGFTLNFISLLALSLVAGVLVDDAIVEIENIVRHMRMGK
SSYQASIDAAEEISLAVLATTMAIVAVFMPVALMPGISGQFFIQFGLTTVVAVLMSLAVA
RLITPLVAAYFLRAEGVREHGEGPVMDRYMALLKWSLVHRWKTAIFGGGGALIATVIAFY
TLPITFQPETDDDFSRVNIEMVPGTTLEETERVSDQVAAILREQPEVRTAFQRIEPGSGR
IFMTLRDDRERESTEFERETAPLLRAIPDARVTFQSQQGGFSGRDISMVIGGDDPDVLDA
AADELVSQMSELDTIIAPRIDGDLRRPEIVVTPRLDLAADLGVTTAELSRAIRIATQGEI
DQNAARFSLSDRQIPIRVALAEESRRDLATIENLPVTTANGGSVPLRLVADIGFGSGPTE
IRRYDQRRRIVVGADLAPGLVTGDAMSEINALPFWDNLPPGVNRVIAGPEEWQAEMLFNF
FVAVLSGVLLVFAVLVLLYRRIMAPLVNMGSLILAPLGSAIALHLVGQPLSMPVFIGLLM
LLGIVAKNSILLVDFAIEEMDKGVDKDTAIIDAGHKRAQPIVMTTVAMTAGMIPTALALT
GDGAWRAPMGWTVIGGLILSTVLTLVIVPACFSLADSIEKRLRRFFGRALTYKPGDDEKA
TIQPAE
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgagtttccgcaccgtatcgacttgggcgatcaagaacccgacgccgccgctcgtgctg
tttctcgggctgatgctggccggaatcgtcagtttcgcccggctcgacgtcaatgacagc
ccggaagtcgatttcccggccgttcaggtgattatcgcgcaacccggcgccgcgccgacg
gagctggagaaccaggttacccagcgcgtcgaagcggcggtgcggaacatcagcggcgtc
aacacactgtcttcgttcgtcaacgagggcaattcgcggactttcatcgagttcacgatc
ggcacgccggtcgatcgggcggtcaacgatgtccgcaacgcgatcgcgcagatccgcggc
gatcttccggaaggcattctcgaaccgcagatcgtccgcgttgaaatcaacggcggcggc
acgatcgcctatttcgccgtcgagaatgtcgacatgactctcgaggaactgagctggttc
gtcgacaatacggttgcgcggcaattgctctcgatcgacggcatggcggcggtcgaccgc
ggtggcggggtcagccgcgaaattcgcgtgatcctcgatcccgcacggctgcaatcgctg
ggtatcacggcgagccaggtcaatgcgcagctgcgcgcggtcaatctcaacgccgccggc
ggccgcgccgaagtcgccggatccgaacaatcggtccgcgtgctcggcaacgccgaaacc
gcctatgagctgggccagaccgatatcgcgctgggcggcgggcggacggtcaagctggcc
gatatcgcggaggtccgcgatctctacggcgagcagcggtcgctctccaagatgaacaat
cgccaggtgctgagcttcggcatcgaacgcgcgaagggcgcctccgacgtcaccgtctat
gacgaagccgagcgcgttctcgccgaaatcgaggagaataatcccggcgtgcagttcacc
cggctgttcaccacggtcgaatatacgcgggagaattacgaatccgcgatgatggcactg
atcgagggcgcgatcctggcggtcatcgtcgtctggttcttcctgcgcgactggcgcgcg
acgctgatctcggcgatcgccattccgctgtccgccattccgaccttctggttcatggac
ctgttcggcttcacgctcaatttcatcagcctgctggcgctgagtctggtggccggtgtc
cttgtcgacgacgcgatcgtcgagatcgagaatatcgtccgccatatgcggatgggcaaa
tccagctatcaggcgtcgatcgacgcggccgaggaaatcagcctcgccgtgctggcgacg
accatggcgatcgtcgccgtgttcatgccggtcgcgctgatgccaggtatctccggccag
ttcttcatccagttcggcctcacaaccgtggtcgcggtgctgatgagccttgcggtggcg
cggctcataacacccttggtcgctgcctatttcctgcgggccgaaggcgtgcgcgaacat
ggcgaagggccggtcatggatcgctacatggcgctcctcaaatggtcgctcgttcatcgc
tggaaaacggccatcttcggcggcggcggtgcgctgatcgcgacggtcatcgccttctac
accctgccgatcaccttccagcccgagaccgacgacgatttcagccgggtcaatatcgag
atggtgccaggcacaacactcgaggaaaccgaacgggtttcggatcaggtcgccgcgatc
ctgcgcgaacagcctgaagtgcgcaccgccttccagcggatcgagccgggcagcgggcgt
atcttcatgacgctgcgcgacgatcgcgaacgcgagagcaccgagttcgagcgggaaacc
gcgccgctactgcgcgccattcccgatgcccgcgtgacgttccagtcgcagcagggcggg
ttcagcggccgcgatatctcgatggtcatcggcggtgacgatcccgacgtgctcgatgcg
gccgccgacgaactcgtcagccagatgagtgagctcgatacgatcatcgcgccgcgcatc
gacggcgatctccggaggcctgaaatcgtcgtcacgccacggctcgatctggccgccgat
cttggcgtgacgacggcagaactcagccgcgccatccgcatcgcgacccagggcgagatc
gaccagaatgcggcgcgtttctcgctcagcgaccggcaaatcccgatccgcgtcgcactg
gccgaggagtcgcggcgcgatctcgcaacgatcgaaaatctgcccgtgacgaccgccaat
ggcggttctgtcccgctgcgccttgtcgccgatatcggcttcggctccggcccgaccgaa
atccgccgctacgaccagcgacgccgcattgtcgtcggtgccgatctcgcaccgggcctg
gtgacgggcgatgccatgtccgaaatcaacgccctgcccttctgggacaacctgccgccg
ggcgtcaatcgcgtcatcgccgggccggaagaatggcaggcggagatgctgttcaacttc
tttgtagccgtgctttccggagtgctgctcgtattcgcggtgctggtgctgctctaccgc
aggatcatggcgccgctcgtcaatatgggatcgctgatcctcgcgccgctgggcagcgcc
atcgcgctccacctcgtcggccagccgctctccatgccggtgttcatcggcctgctgatg
ctgctcggcatcgtcgcgaaaaactcgatcctgctcgtcgatttcgcaatcgaggagatg
gacaagggcgtcgacaaggatacggcgatcatcgatgcaggtcacaagcgcgcccagccg
atcgtcatgacgacggtcgccatgacggccgggatgatcccgacggcgctggcgctgacc
ggcgacggcgcgtggcgggcaccgatgggctggacggtgatcggcggcctgatcctgtcg
accgtgctgacgctcgttatcgtaccggcctgtttcagcctcgccgacagcatcgagaaa
cggctgcggcgcttcttcggacgggcgctgacctacaagcccggcgacgatgaaaaagcg
accatccagccggccgaatga
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