KEGG   Ectopseudomonas alcaliphila: UYA_05610
Entry
UYA_05610         CDS       T06680                                 
Name
(GenBank) conjugal transfer protein TraR
  KO
K06204  RNA polymerase-binding transcription factor
Organism
pall  Ectopseudomonas alcaliphila
Brite
KEGG Orthology (KO) [BR:pall00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02026 Biofilm formation - Escherichia coli
    UYA_05610
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pall03000]
    UYA_05610
   03021 Transcription machinery [BR:pall03021]
    UYA_05610
   03009 Ribosome biogenesis [BR:pall03009]
    UYA_05610
Transcription factors [BR:pall03000]
 Prokaryotic type
  Other transcription factors
   Others
    UYA_05610
Transcription machinery [BR:pall03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription elongation factors
     UYA_05610
Ribosome biogenesis [BR:pall03009]
 Prokaryotic type
  rRNA transcription factors
   UYA_05610
SSDB
Motif
Pfam: zf-dskA_traR DksA-like_N
Other DBs
NCBI-ProteinID: APU29236
LinkDB
Position
1260989..1261333
AA seq 114 aa
MAHRDVLDALLHDYTTRAEAIRRDLGRSHSADFAEQAQQRQNDEVLEALLAEAEQGLLLV
RQAKQRLAEGRYGECLCCGEPIEAARLAVLPVAEYCLRCAEDLGDYSSQAARLK
NT seq 345 nt   +upstreamnt  +downstreamnt
atggctcaccgtgatgtgctggacgctctgctgcatgactacaccacccgcgccgaggcg
attcgccgcgatctggggcgcagccactcggcggatttcgccgaacaggcgcagcagcgg
cagaatgacgaagtgctcgaagccctgctggccgaggctgaacagggattgctactggtg
cgccaggccaagcagcgcctggccgaagggcgttatggcgagtgcctgtgttgtggcgag
ccgatcgaggcggcgcgcctggcagtcctgccagttgccgaatactgcttgcgctgcgcc
gaggatcttggcgattacagcagccaggcggccaggctgaagtag

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