Paludihabitans sp. MB14-C6: RBG61_13495
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Entry
RBG61_13495 CDS
T09321
Name
(GenBank) M15 family metallopeptidase
KO
K07260
zinc D-Ala-D-Ala carboxypeptidase [EC:
3.4.17.14
]
Organism
palm
Paludihabitans sp. MB14-C6
Pathway
palm00550
Peptidoglycan biosynthesis
palm01100
Metabolic pathways
palm01502
Vancomycin resistance
palm02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
palm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RBG61_13495
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RBG61_13495
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
RBG61_13495
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
palm01002
]
RBG61_13495
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
palm01011
]
RBG61_13495
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
palm01504
]
RBG61_13495
Enzymes [BR:
palm01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.17 Metallocarboxypeptidases
3.4.17.14 zinc D-Ala-D-Ala carboxypeptidase
RBG61_13495
Peptidases and inhibitors [BR:
palm01002
]
Metallo peptidases
Family M15: zinc D-Ala-D-Ala carboxypeptidase family
RBG61_13495
Peptidoglycan biosynthesis and degradation proteins [BR:
palm01011
]
Peptidoglycan biosynthesis and degradation
Carboxypeptidase
RBG61_13495
Antimicrobial resistance genes [BR:
palm01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Lac type [MD:
M00651
]
RBG61_13495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VanY
DUF6550
Peptidase_M15_4
SpoIIIAH
DUF7248
DUF1244
Vpu
DUF4834
Motif
Other DBs
NCBI-ProteinID:
WMJ22983
LinkDB
All DBs
Position
2840330..2841187
Genome browser
AA seq
285 aa
AA seq
DB search
MNKLFYQRRQNTKEKLITKIKVIIMVAMILVICVLGYVGVTIAAKSENRDVKSLNAKISE
QMISSQTVSKSNQSTISSGQAQTTVNSSHKTDQPASINGRPWNLVLVNRWNKIDERSTNI
KLTQLKNGQSVDERIYPELQKMMDDCRAAGLSPLICSSYRTTEKQTRLYNNQIDNYIRKG
FARADAVVEAGKWSAIPGTSEHQLGLAVDIVSTSNQMLDKSQEQTAEQKWLMENSYKYGF
ILRYPSSKSQITGINYEPWHYRYVGKEAAAAIKKQAICLEEYLKK
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaataaactattctatcaaagacgtcaaaatacaaaagaaaagttgataacgaaaata
aaagtaattattatggtagcaatgatactcgttatttgtgttttaggctatgtaggagtg
acgatagcagcaaaatcagaaaatcgagatgttaagtcattaaatgcaaaaatcagtgaa
caaatgatttctagccaaaccgtatcaaaaagtaaccaatctacgatttcatccgggcaa
gctcaaaccactgtaaacagcagtcataaaacagatcagcctgcatcgataaacggaagg
ccatggaatttagtacttgtgaatcgctggaataaaattgatgaaagaagtacgaatatt
aaacttacacaactaaaaaatggccaatctgttgatgaacgcatttatccggagcttcaa
aaaatgatggatgattgtagagcggcagggctttctccacttatttgttcctcatataga
acaactgaaaagcaaactaggctttacaataatcagatagataattatatcagaaaagga
tttgccagagcagatgcagtggttgaagcgggaaaatggagtgcaattccaggaacaagt
gaacatcaattagggcttgctgttgatattgtatcaacaagtaaccaaatgcttgataaa
tcacaggaacaaaccgcagaacagaaatggctaatggaaaacagctataaatatggattt
attctacgctatccttcttcaaagagccaaataacaggaattaactatgagccttggcat
tatagatatgttggtaaagaagcagctgcagcaataaaaaaacaggccatttgtcttgaa
gaatacttgaaaaaataa
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