Paracoccus alcaliphilus: JHW40_16855
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Entry
JHW40_16855 CDS
T08960
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
palp
Paracoccus alcaliphilus
Pathway
palp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
palp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JHW40_16855 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
palp03400
]
JHW40_16855 (nth)
Enzymes [BR:
palp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
JHW40_16855 (nth)
DNA repair and recombination proteins [BR:
palp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
JHW40_16855 (nth)
Prokaryotic type
JHW40_16855 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
WCR17940
LinkDB
All DBs
Position
complement(3267986..3268648)
Genome browser
AA seq
220 aa
AA seq
DB search
MAKTRSIPPALPFADQVAIFSRLAESNPTPETELNFTNPYTLVVAVALSAQATDVGVNKA
TRGLFAIADTPQKMLDLGLEGVTEHIKTIGLFRQKAKNVIAMSRILVEDYGGEVPDSRSA
LMSLPGVGRKTANVVLNSAFGHSSQAVDTHIFRVGNRTRIAPGRDVDEVERAIEDNVPVR
FQQHAHHWLILHGRYICQARRPRCAVCIINDLCPYEEKTG
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atggccaagacccgctccatcccgcccgcccttccgttcgccgatcaggtcgcgatcttc
tcgcggctggccgaatccaacccaaccccggaaacagagctgaacttcaccaacccctat
acgctggtggtggcggtggcgctgtcggcgcaggcgaccgatgtcggagtgaacaaggcg
accagaggtctgttcgcgattgccgacacgccgcagaagatgctggatctggggctggag
ggcgtgaccgagcacatcaagaccatcggcctgttccggcagaaggcgaagaacgtgatc
gccatgtcgcgcatcctggtcgaggattacggcggcgaggtccccgacagccgaagcgcg
ctgatgagcctgccgggcgtcggtcgcaagaccgccaatgtggtgctgaacagcgccttc
ggccattcttcgcaggcagtggacacgcatatcttccgcgtcggcaaccgcacccggatc
gcgccgggccgcgatgtcgatgaggtcgagcgcgccatcgaggacaatgttccggtccgc
tttcagcaacatgcccatcactggctgatcctgcatggccgctatatctgtcaggcgcgg
cgcccgcgctgcgcggtctgcatcatcaacgacctgtgcccctatgaggagaagaccgga
tga
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