Pseudonocardia alni: PaSha_11570
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Entry
PaSha_11570 CDS
T11230
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
palq Pseudonocardia alni
Pathway
palq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
palq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PaSha_11570 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
palq03400
]
PaSha_11570 (nth)
Enzymes [BR:
palq01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
PaSha_11570 (nth)
DNA repair and recombination proteins [BR:
palq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PaSha_11570 (nth)
Prokaryotic type
PaSha_11570 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
HHH_8
HHH_5
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
WFG46715
LinkDB
All DBs
Position
complement(2346943..2347707)
Genome browser
AA seq
254 aa
AA seq
DB search
MAARVAAGESPIGRARRVNRILRSLAEAYPHAHCELDFTTPLDLAVATILSAQCTDERVN
QVTPALFARYPTAADYAGADRTELEELIRSTGFYRNKATSLTGLGAAVVERHGGELPSTL
DELVKLPGIGRKTANVILGNAFGVPGITVDTHFGRLVRRWGWTTEEDPVKVEHAIGELVP
RRDWTIVSHHVIFHGRRVCHARKPACGACTLAADCPAFGLGPTDPGEAAALVKGPERDHL
LALAGIAGPPGDGR
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
ctggccgcgcgcgtcgcggccggggagagcccgatcgggcgagcgcgccgggtcaaccgc
atcctcaggtcgctggcggaggcctatccgcacgcgcactgcgagctggacttcaccacc
ccactggacctcgccgtcgcgacgatcctgtccgcgcagtgcaccgacgagcgggtcaac
caggtcaccccggcgctgttcgcccggtaccccaccgccgcggactacgcgggcgccgac
cggaccgagctcgaggagctgatccgctccaccggcttctaccggaacaaggcgacgtcg
ctgaccgggctgggtgccgccgtcgtcgagcggcacggcggggagctgccgtcgacactg
gacgagctggtgaagctgcccggcatcggacgcaagaccgcgaacgtcatcctcggcaac
gcgttcggcgtccccgggatcaccgtcgacacccacttcggacgcctggtgcgccgctgg
ggctggacgaccgaggaggacccggtcaaggtcgagcacgcgatcggcgagctcgtcccg
cggcgggactggacgatcgtgtcccaccacgtgatcttccacgggcgccgggtctgccat
gcgcgcaagccggcctgcggcgcctgcacgctcgcggcggactgtcccgccttcgggctc
ggccccaccgacccgggcgaggccgcggcgctggtcaagggcccggagcgggaccacctg
ctcgcactcgcggggatcgcggggccgcccggggacggccggtga
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