Pseudonocardia alni: PaSha_26680
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Entry
PaSha_26680 CDS
T11230
Name
(GenBank) bifunctional RNase H/acid phosphatase
KO
K22316
ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:
3.1.26.4
3.1.3.73
]
Organism
palq Pseudonocardia alni
Pathway
palq00860
Porphyrin metabolism
palq01100
Metabolic pathways
palq01240
Biosynthesis of cofactors
palq03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
palq00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
PaSha_26680
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PaSha_26680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
palq03032
]
PaSha_26680
Enzymes [BR:
palq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.73 adenosylcobalamin/alpha-ribazole phosphatase
PaSha_26680
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
PaSha_26680
DNA replication proteins [BR:
palq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
RNase H
PaSha_26680
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
His_Phos_1
RVT_3
RNase_H
Motif
Other DBs
NCBI-ProteinID:
WFG46406
LinkDB
All DBs
Position
complement(5500323..5501474)
Genome browser
AA seq
383 aa
AA seq
DB search
MRLVVEADGGSRGNPGPAGYGAVVLDAGAHQVLGEVYDGLGTTTNNVAEYRGLIAGLRAA
RDLGATEVEARMDSKLVVEQMCGRWKIKHPPLQELADTARELAAGFDAVTFVWIPRKDNA
RADALANRAMDGESNPTLDPSGAVGPAPKPPAGAIASTDSAAAAAAWTGQTGSPTRLILL
RHGQTELSVERRYSGHGDPELTELGQKQAAAAARALEARLSGQGVEPAVVLSSPLRRARQ
TAAAVAETTGADLEVRDGLIETDFGGWEGLTFTEARERDPELHGRWLGSADVEPPGGESF
RAVGERVEAERARIVEEFAGRTVVLVSHVTPIKMLLRTALGAGDEVLYRMHLDLACLNIA
DFYPDGGASVRLVNETSYLDDLR
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
gtgaggctggtcgtcgaggcggacggcggctcccgcggcaaccccgggcccgccggctac
ggcgcggtcgtgctcgacgccggcgcccaccaggtgctcggtgaggtctacgacggcctc
gggaccaccaccaacaacgtcgccgagtaccgcggcctgatcgccgggctgagggccgcc
cgcgacctgggggccaccgaggtcgaggcccggatggactccaagctcgtcgtcgagcag
atgtgcgggcgctggaagatcaagcacccgccgctgcaggagctcgccgacaccgcccgc
gagctggccgcgggcttcgacgcggtcaccttcgtgtggatcccgcgcaaggacaacgcc
cgcgccgatgcgctcgccaaccgggcgatggacggggagtcgaaccccaccctggacccg
tccggggcggtgggaccggcgccgaagccgcccgcgggcgcgatcgcgtcgacggactcc
gcggccgccgcggccgcgtggaccgggcagacgggctccccgacgcggctgatcctgctg
cgccacggccagaccgagctgtcggtcgagcgccgctactccggccacggcgatcccgag
ctgaccgagctgggccagaagcaggccgccgccgcggcccgcgcgctggaggcccggctg
tcgggccagggtgtcgaaccggccgtggtgctgtcctcgccgctgcgccgggcccgccag
accgcggccgccgtcgccgagacgaccggggcggacctcgaggtccgcgacggcctgatc
gagaccgacttcggtggctgggagggtctcaccttcaccgaggcccgcgagcgcgacccc
gagctgcacggccgctggctcggatccgccgacgtcgaaccgccgggcggcgagagcttc
cgcgcggtgggggagcgggtcgaggccgagcgggcccggatcgtcgaggagttcgccggt
cggacggtggtcctggtcagccacgtcacgccgatcaagatgctgctgcgcaccgcgctc
ggcgccggcgacgaggtgctctaccgcatgcacctggacctggcctgcctcaacatcgcc
gacttctaccccgacgggggcgcctcggtgcgtctggtcaacgagacgtcctacctggac
gacctccggtag
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