Populus alba (white poplar): 118032910
Help
Entry
118032910 CDS
T07314
Name
(RefSeq) structural maintenance of chromosomes flexible hinge domain-containing protein GMI1 isoform X1
KO
K23113
structural maintenance of chromosomes flexible hinge domain-containing protein 1
Organism
palz
Populus alba (white poplar)
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
palz03036
]
118032910
03400 DNA repair and recombination proteins [BR:
palz03400
]
118032910
Chromosome and associated proteins [BR:
palz03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
118032910
DNA repair and recombination proteins [BR:
palz03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
118032910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c_3
SMCHD1_S5
HATPase_c
Motif
Other DBs
NCBI-GeneID:
118032910
NCBI-ProteinID:
XP_034893596
LinkDB
All DBs
Position
12:2238226..2257418
Genome browser
AA seq
1579 aa
AA seq
DB search
MEVKPSRKRQLELVPHGGGGGGGGGGGGGGGGGSEGGVVYKFKILLPNGMTVIVRLTDPK
PEMWVQDFIGLVKREYAVAQRDSSPLMKKKRTLNWESESWFVEDGNGNLMRQRLKFKSFK
PHKCHILRLHDGSAEVTDTFENMWDLTPDTELLRELPEEYTFETALADLIDNSLQAVWSV
GENGRKRISVDIMKDKISIFDTGPGMDASDENSIVKWGKMGASLHRSFKAKAIGVKPPYL
IPYFGMFGYGGPIATMHLGRRALVSSKTKESKKVYTLHLEREALLRSSGSEPTWKTSGGM
RDPSEDEIGKSPQGSFTKVEILEPKVRDLDRFQLQCKLKDIYFPYIQCDEVSKTGKTTRP
VEFQVNGIDLAEIDGGEVSTTNLHSCNGPEFVFQLCFSIKQDVASTRSSGSRASQEANAR
IKCVYFPISEGKESIEKILENLEDQGCGNGESFETFTRVSIRRLGRLLPDARWACLPFME
FKQKKGDKAHILKRCCLRVKCFFETDAGFNPTPSKTDLAHCNPFTIALKNFSHKMLEKEK
EVNVDISRNGKLLSPSHLEKEYEDWILEMHSQYDIEVSAGEDDGVLVVGPTNKIPGISSD
VVRVRDTLTRKGKIWKRGQKIKVLKGAGPGFHNKNVYLTLEHFLIEGVQGDAGGDARIIC
RPLDIAEENGCVLSVKDEIARFDIRSSISIPISVIDSGKCQTIESSEWNCQLQKQSQKAP
STIEVLGRKHCRELEIDGGFPAESTVEAGCAPPTEIVAVVRPGCYVSSSHSKILDQKYIV
KTNLEMSIEVKIKKSAEESQNVGHLYSARIGPSSRKGFDGLYIFSLGCKLPSSFKEAGVY
TFLFTLSDKNCKKYEKRLMVKASQEVGKWKLLGDIQGKPCVRVGSRFPSLSIGCLDIHGN
QIPFKSVPEITVRLDSIVGVLAEIDKFKKGLSSDKLALKVQNVLIVSDKLDRIRPEYEAT
LVICPVDGLVSVSIPCQVMPGLVPHITGQPPIQEKHLLPGFVVKELVLKILDAHGNHIKK
GLEVQLNVDGFHILDKEGSKRKVDEDGCIDLSGVLKVTAGFGRIVSYSVSYQDKVVFKQE
LQTEKRELRIASKLPEFLTAGSDLENIVFEVVDSQGDVDPRIHNEEKAGQCHSLTIKSDS
FNLQDAIQYTLRHGRCTIPAIRIPPSEGNYCFIAAHSCYTELQLRVILRVMKAPIVECDE
ILSPYSSRKVPLLQDSLSLEHTESLMTPIENNEKGLVDDIEKYGERIGNSERQLEVLNEK
KTEIEEYVSGLQVRLALLPASMEPTLNNSNYVLTKEEILVQIESRNHSAASILCHCYRDL
SSQVPQNHFMEGIFGLVALLGTVRTNKLSRILAEFLGEDQMLAVVCRSKEAASAFGKSIC
GRFLVICLEDIRPYTGELECGDPQRKLKLQDPTLQCGNVPSGFIGYAANMINIDTPDMNI
STASGYGLRETLFYRLFGELQVYDTKEDMNEAGACIKHGAVSLDGGIIRVTENGIMSLGC
WDSEICFPVGTLENETSLAPEVMKIQMQLEAGMEMLQDITGQIELVTRLRENALKKLKKK
SKNYIKLMDQAVESLRKRK
NT seq
4740 nt
NT seq
+upstream
nt +downstream
nt
atggaagtgaagccgagtagaaagagacagttggaattggtgccgcatggtggtggtggt
ggtggtggaggaggaggaggaggaggaggaggaggaggaagtgaagggggggtggtttac
aaattcaagattttgttaccgaatggaatgactgtgattgtgagactgactgatccgaaa
cctgaaatgtgggtgcaagactttattggtttggttaaacgagaatatgctgtagctcaa
agagattcatcacctttgatgaaaaagaaaagaactttgaactgggaaagtgaaagttgg
tttgtggaggatggaaatggtaatttaatgaggcagaggcttaagtttaagtctttcaag
ccgcataaatgccacatccttcggcttcacgatggatccgctgaggttactgatactttt
gagaacatgtgggatttgactcctgataccgaattacttagggagttgccagaagagtat
acctttgagaccgcacttgctgatttaattgataattccttgcaagcagtatggtctgtt
ggtgaaaatgggaggaaacggatcagtgtggacattatgaaggataagatttcaattttc
gatactggtcctggaatggatgctagtgatgaaaattctatagtgaaatggggaaagatg
ggagcctcactgcatagatcattcaaggcaaaagcaataggggtcaaacctccttatttg
ataccttattttggcatgtttggatatggtggaccaattgctaccatgcatttagggaga
cgtgctttagtatcttccaagacaaaggagtcaaagaaagtctatactctacatcttgag
agagaggctctgctccgcagttctggttctgaaccaacttggaagactagtggaggcatg
agggatccttcagaagatgaaattggaaaatcccctcagggaagtttcacaaaggttgag
atattggagcctaaagtaagagacttggacagatttcaactccagtgcaagctgaaggac
atatattttccttatattcagtgtgatgaggtgtccaaaactgggaagactaccagacct
gttgaatttcaggttaatggtattgatttagctgagattgatggtggggaggtgtcaact
accaacttgcactcttgcaatggtccagagtttgtttttcagctttgcttttccatcaaa
caggatgttgcctcaaccagaagctcaggttcaagggcgtctcaagaagccaatgcacgt
ataaagtgtgtttatttccccatttctgagggaaaagagagtattgaaaagatattggag
aatttggaagatcaagggtgcggaaatggagaaagctttgagaccttcacacgtgtctct
attcggaggcttggccgtctacttccagatgctcgttgggcatgtcttccttttatggaa
ttcaagcagaaaaaaggagataaagctcacatattgaagagatgctgcttaagagttaaa
tgtttttttgagactgatgctggtttcaatccaacaccctcaaagactgatctagcacac
tgcaatccttttacaattgctttgaagaacttcagccataagatgcttgagaaagaaaaa
gaagttaatgttgacatttcaaggaatggtaaattgttaagtccttcacatctggaaaag
gagtatgaagattggattcttgaaatgcattctcaatatgatatagaagtcagtgctggt
gaggatgatggagttcttgttgttggccccacaaacaaaatacctggcatttcatctgat
gttgtgagagtgcgtgatactttgacgaggaagggaaaaatttggaaacgtggtcagaaa
ataaaagttttaaagggagctggcccagggttccataataaaaatgtttacctaacatta
gaacattttttgattgaaggagttcaaggcgatgctggtggggatgctcggattatatgc
aggccactggacattgcagaggagaatggctgcgtgctttcagttaaagatgagattgcc
agatttgatattcgcagctctatatcaatacctattagtgtgatcgactctgggaagtgc
caaactattgaaagttctgagtggaattgccaacttcagaagcaaagtcagaaagctccc
tctacgattgaagtgcttggaagaaaacattgtcgagagttggagattgatgggggattc
cctgctgaatctactgttgaagctggatgcgctcctccaacggaaatagtggcagttgtt
cggcctggctgttatgtttcttccagtcattcaaagattttggaccaaaagtatattgtc
aaaactaatttagagatgtctatagaggttaaaatcaaaaaatcagcagaggaaagccaa
aacgtaggccatttatattcagcacgcataggtccttcttctcgtaaaggatttgatggc
ttgtacattttttcactgggttgcaagttacccagctcatttaaagaggctggtgtttac
acttttttattcactcttagtgataaaaattgtaagaaatatgaaaaaagattgatggtc
aaggcatctcaagaggttggaaagtggaagcttttgggtgatatacagggaaaaccatgt
gtgagggtgggttcacgatttccatcactctctattgggtgtcttgacatccacggcaat
caaatcccatttaaatctgttccagaaataactgtgaggctagattcaattgtgggtgtg
cttgctgaaatagacaaatttaagaaaggcctttcttctgataaattggccctaaaagtt
cagaatgtgctaattgtgagcgacaagttggatagaatacggccagagtatgaagccact
ttggtgatatgccctgtagatgggttggtttcagtttctattccgtgtcaagttatgcct
ggattagtaccgcacatcacaggccaaccaccaatacaggaaaaacacttgcttccaggt
ttcgtggtgaaagaacttgtgttaaagatacttgatgctcatggtaaccacatcaaaaaa
ggtttggaagttcagttgaatgtggatgggtttcatatccttgataaagaaggttcaaag
cgtaaggtggacgaggatggatgcattgatctcagtggtgtcttgaaggtaacagctggt
tttggaagaatagtatcatactctgtttcttatcaagacaaagttgtttttaagcaagag
cttcaaactgagaagagggagctgagaattgcatcaaagctaccagagtttcttaccgca
ggatctgatctggaaaatatagtttttgaagttgtcgattctcagggtgatgttgatcct
cgtattcataatgaagagaaagctggccagtgccattcactaactataaagtcagattca
tttaatttacaggatgctattcagtatactttgaggcatggtcgctgcactattccagct
attcgaatccctccaagtgaaggaaactattgctttattgctgctcactcctgttacaca
gagctgcagctgagggtcatacttcgagtcatgaaagccccaatagtggagtgtgatgag
attttatcaccatattcaagcagaaaagtcccactgcttcaggactcattatcccttgag
catactgaaagcctaatgacgcccattgaaaataatgaaaagggactagtggatgacatt
gaaaaatatggcgagcgaattggaaattctgaaaggcaactagaagtcctgaatgaaaaa
aagacagaaattgaggagtacgtgtctggactgcaagtgcggttggctttgctcccagct
tccatggaaccaaccttgaacaattcaaactatgtgcttactaaggaggagatcctggta
caaattgaaagcaggaaccattctgcagcatctattctttgccattgttatagagattta
tcatcgcaagtaccacaaaaccatttcatggagggtatattcgggttggttgccctcctt
ggaactgttcgcaccaacaagctaagcaggatattggctgagttcttgggtgaagaccaa
atgcttgctgttgtgtgcagatccaaggaagctgcgagtgcttttggaaaatctatttgt
ggtcgttttcttgttatatgcctggaggatataaggccttacacaggggagcttgaatgt
ggtgatccacagaggaaactaaagctgcaagatcctacattacaatgtgggaacgtgcca
tcaggtttcattgggtatgctgccaatatgattaatatagataccccggatatgaacata
agcacagcatctggatatggtcttcgagaaactttgttctatcgtctttttggagaactc
caagtttatgacaccaaagaagatatgaatgaagccggtgcttgtatcaaacatggtgct
gtttctttagacggtgggatcatcagagtcactgaaaatggaattatgtctcttggatgc
tgggattctgaaatttgctttccagtcgggaccttggagaatgagacgagtcttgctcca
gaggtgatgaaaatccaaatgcaactcgaagcaggcatggaaatgttgcaagatataaca
ggacagatagagcttgtgaccagactccgtgaaaatgctttaaagaagttgaagaagaaa
tccaagaattatatcaaacttatggatcaggcagtggagtctctgcgtaagaggaaatag
DBGET
integrated database retrieval system
