Populus alba (white poplar): 118040120
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Entry
118040120 CDS
T07314
Name
(RefSeq) uncharacterized protein
KO
K11086
small nuclear ribonucleoprotein B and B'
Organism
palz
Populus alba (white poplar)
Pathway
palz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118040120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
palz03019
]
118040120
03041 Spliceosome [BR:
palz03041
]
118040120
03032 DNA replication proteins [BR:
palz03032
]
118040120
Messenger RNA biogenesis [BR:
palz03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
118040120
Spliceosome [BR:
palz03041
]
Complex A
U1 snRNP components
Sm proteins
118040120
U2 snRNP components
118040120
Complex B
U1 snRNP components
118040120
U4/U6.U5 tri-snRNP components
118040120
Complex C
U2 snRNP components
118040120
DNA replication proteins [BR:
palz03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
118040120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
118040120
NCBI-ProteinID:
XP_034902878
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All DBs
Position
1:49943053..49945483
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AA seq
289 aa
AA seq
DB search
MSMSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKNN
EEREDRRTLGLVLLRGEEVISMTVEGPPPPEESRAKAVSAAAASGPGLGRAAGRGIPTAP
LIQAQPGLAGPVRGVGGPSPGMMQPQFMRPPVPQHSAPPMTYPAASAPPPGGAPVVRPPG
QMPPGPYPGQGPPMGRGPPPPGPLQFSARPPQGFPMPPQFAQRPMGMPPQGQAPMMRGPP
APPRPGMPAPPPPRPGMPPPPGGHVPVFGPPRPGMPPPPNAQQQQNQQQ
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgtcaaagagctctaagatgctccaatacataaactaccggatgcgtgtgacc
atccaagatggtcggcagctggtagggaaattcatggcctttgatcgccacatgaacctt
gtacttggtgattgcgaggagttccgcaagctcccaccagcaaagggcaagaagaacaat
gaagagcgtgaggaccgccgaacacttggccttgttcttcttcgtggtgaagaggtcatc
tctatgactgttgagggccctcctcctcctgaagagtctcgcgccaaggctgtctctgcc
gcagcagcttctggtcctggtcttggtcgtgctgctggccgcggaattcccactgctcct
cttattcaagcccagcctggccttgcaggtcctgttcgtggtgtgggtgggccttcccct
ggcatgatgcagccacaattcatgcgccccccagtcccacaacattctgctccacccatg
acttaccctgcagcaagtgctccaccacctggtggtgcacctgtggtccgaccacctggc
cagatgcctcctggaccatatcctggtcagggtccaccaatgggtcggggtccaccacca
ccaggtccactacaattttctgctaggcccccccagggtttcccaatgccaccacagttt
gcccagagacctatgggaatgccaccccagggacaggcaccaatgatgagaggaccacct
gctccaccaagacctggaatgcctgcaccacctccaccccgtcctgggatgccacctcca
cctggtggtcatgttcctgtttttggaccacctcgtccgggaatgccgccacctcccaat
gcccaacagcagcagaatcagcaacaatag
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integrated database retrieval system