KEGG   Populus alba (white poplar): 118040789
Entry
118040789         CDS       T07314                                 
Name
(RefSeq) uncharacterized protein
  KO
K11086  small nuclear ribonucleoprotein B and B'
Organism
palz  Populus alba (white poplar)
Pathway
palz03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:palz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    118040789
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:palz03019]
    118040789
   03041 Spliceosome [BR:palz03041]
    118040789
   03032 DNA replication proteins [BR:palz03032]
    118040789
Messenger RNA biogenesis [BR:palz03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     118040789
Spliceosome [BR:palz03041]
 Complex A
  U1 snRNP components
   Sm proteins
    118040789
  U2 snRNP components
    118040789
 Complex B
  U1 snRNP components
    118040789
  U4/U6.U5 tri-snRNP components
    118040789
 Complex C
  U2 snRNP components
    118040789
DNA replication proteins [BR:palz03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     118040789
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 118040789
NCBI-ProteinID: XP_034903707
LinkDB
Position
11:complement(22152930..22157009)
AA seq 284 aa
MSMSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKNN
EEREDRRTLGLVLLRGEEVISMTVEGPPPPEESRAKAVSAAAVAGPGLGRAAGRGIPTAP
LVQAQPGLAGPVRGVGGPSPGMMQPQLSRPQLSAPPMSYPAASGLPTGGAPIVRPPGQMP
PMPYPGQGPPMGRGPPPPGPPQFAARPPQGFPMPPQFAQRPMGGPPQPQMMRGPPAPPRP
GMPAPPPPRPGMPLPPGGHVPVFGPPRPGMPPPPNSQQQQNQQQ
NT seq 855 nt   +upstreamnt  +downstreamnt
atgtcgatgtcaaagagttcgaagatgctccaatatatcaactatcggatgcgtgtgacc
atccaagatggccggcagctggtagggaaattcatggcctttgatcgccatatgaacctt
gtacttggtgattgtgaggagttccgtaagctcccaccagcgaagggcaagaagaataat
gaggagcgtgaggaccgccgtactcttggccttgttctccttcgtggcgaagaggtcatc
tctatgactgttgagggccctcctcctcctgaagagtctcgtgccaaggctgtctctgct
gcagctgttgctggtcccggtcttggtcgtgctgctggccgtggaattcctactgctcct
cttgttcaggcgcagcctggcctagcaggtcctgtccgtggtgttggtgggccttcccct
ggcatgatgcagccacaactctctcgtcctcaactttctgctccacccatgtcctaccct
gcagcaagtggtctgccaactggtggtgcacctattgtccggccacctggtcagatgcct
cctatgccatatcctggccagggtccaccaatgggccggggtccccctccaccaggtcca
cctcaatttgctgctaggcccccacagggtttcccgatgccaccacagtttgcccagaga
ccaatgggagggccaccacagccacaaatgatgagaggaccacctgctccaccaagacct
ggaatgccagcaccacctccaccccgtcctgggatgccacttccacctggtggtcatgtt
cctgtttttggaccccctcgtccgggtatgccacctcctcccaattcccaacagcagcag
aatcagcagcaatag

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