Populus alba (white poplar): 118041138
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Entry
118041138 CDS
T07314
Name
(RefSeq) transcription factor PIF3 isoform X1
KO
K12126
phytochrome-interacting factor 3
Organism
palz
Populus alba (white poplar)
Pathway
palz04075
Plant hormone signal transduction
palz04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
118041138
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
118041138
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
palz03000
]
118041138
Transcription factors [BR:
palz03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
118041138
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Motif
Pfam:
HLH
bHLH_SAC51
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
118041138
NCBI-ProteinID:
XP_034904186
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Position
14:complement(8609954..8612754)
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AA seq
566 aa
AA seq
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MDDRGHMELVWENGQVLMRVLHTSSSCTSYTPHPIKNVSEVENNSDGYTTKRPRLGTGDS
ILGDFPLMDDRELAKRDYKSSQDDHHPELFSELCETNLNMLLENNENNIYEKNITDAHVV
PGYKDANWGPENASEFAAEVPQLTTASNGQLYESFLEQHKASAPLFNGLPNSKLQQVDSG
SDNHSRLQNLSHILRPALPKPNQGINATRPTSGPGSSRLQQLKSNTDEPPAGCRNLVESG
QMVPTNDSKVFKYFHDQQYLLASQIVPIGPIDRSAEASPPDEQSEAVLHNYATTSKRCCD
RVFGSTLGSAEKTIKGKPDRGKSIDQLTTTSSICSRGASNDPSSSLERQYEDTEGTAYTS
DDLEEEEQVPARGSAGSKRRLSKRRRATEIHNLSERKRRDKINKKMRALQDLIPNSNKVD
KASMLGEAIDYLKSLQLQVQMMSMGTRLCMPLMMLPTGMQHIHSPLLAQFSPMGVGMDTR
LMQMGVGCSPATFPASGMFGLPAGQMLPMSVSQAPFFPFNIGGHSTHSSVPMPAMSGVVS
NPLDFLRSAVFPGSKDVIHSNTSARK
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggatgatcgcgggcatatggaattggtgtgggaaaatggtcaggttcttatgcgagta
ttgcacactagtagctcatgcaccagttacactcctcatcctataaaaaatgttagtgaa
gtcgagaataacagtgatggctacactacaaagaggccaaggttaggaactggggattct
atcttgggcgactttcctttgatggatgatagagaactcgccaagcgtgactacaaatct
tcgcaagacgatcaccatcctgagttattctctgaattatgtgaaactaatctcaatatg
ctcttggaaaataatgaaaataacatttatgagaagaatatcacggacgcccatgttgtt
ccggggtataaagatgcaaattggggaccggagaatgcgtccgagtttgcagcagaagtt
cctcagcttacaacagctagtaatggtcagctatatgagtctttcttggagcaacacaaa
gcttcagctccgctattcaatggattgcccaattcaaagctgcagcaggtggattctgga
tctgacaaccactcgaggttgcagaacttgtcccacattttaaggccagctcttcctaaa
cctaatcagggcattaatgcaacaagaccaacaagcggtcctggatcatcaagactccag
caactgaaaagcaacactgacgagcctccagcaggttgtagaaatcttgttgagtcggga
cagatggtgccgactaatgattcaaaagtttttaaatatttccatgaccaacaatatcta
ttggcaagtcagatagttcctattggaccaattgacaggtccgcagaagcgtcaccccca
gatgagcaatctgaagctgttctccataactatgccactaccagtaagaggtgctgcgat
cgggttttcggttcaaccttaggctccgcagaaaaaacaataaaggggaagcctgataga
ggaaaatctatagatcaactgactacaactagttcaatatgctcacgaggagcttcaaat
gatccatcatcttctctagaaaggcaatatgaagacacagaggggacagcgtatacaagc
gatgatcttgaggaagaagaacaagtacctgctcgagggagtgcaggttccaagagaagg
ctttccaagagaaggcgagcaacagaaatccataatctgtctgaaaggaagagaagagat
aagatcaacaagaagatgcgtgcattacaagatctaatacccaattcaaataaggtggat
aaagcttctatgcttggtgaggcaatagactacctaaaatcccttcagcttcaagtacag
atgatgtcgatgggaactaggctttgtatgcctctaatgatgttaccaacaggaatgcaa
catatacattcaccacttttagctcaattttctcctatgggtgtggggatggatacgaga
ttaatgcaaatgggtgttggatgcagtccagcaacattcccagcttcaggtatgtttggg
ctaccagctggtcagatgctacccatgtcggtatcacaagcgccattctttccttttaat
atcggagggcattccacacactcatctgttccgatgccggccatgtctggggtggtcagt
aatcctctggattttttgcgctctgctgtctttccaggttcaaaggatgttattcactcc
aatacatcagctcgcaaatga
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