Populus alba (white poplar): 118047969
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Entry
118047969 CDS
T07314
Name
(RefSeq) lycopene epsilon cyclase, chloroplastic isoform X1
KO
K06444
lycopene epsilon-cyclase [EC:
5.5.1.18
]
Organism
palz
Populus alba (white poplar)
Pathway
palz00906
Carotenoid biosynthesis
palz01100
Metabolic pathways
palz01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
118047969
Enzymes [BR:
palz01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.18 lycopene epsilon-cyclase
118047969
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GFIT
Motif
Pfam:
Lycopene_cycl
DAO
Pyr_redox_2
HI0933_like
GIDA
FAD_binding_2
FAD_oxidored
Thi4
Pyr_redox_3
Motif
Other DBs
NCBI-GeneID:
118047969
NCBI-ProteinID:
XP_034913336
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Position
6:complement(12934940..12944316)
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AA seq
551 aa
AA seq
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MECVGARNFGAMPAVLLSCPCPVWRSKTGAATQPQSSSSAKQSVFKSNKRFRLCQVRSGG
GSNSSRGMNDSCSSVAVKEGMFADEEDYIKAGGSELGFVQMQRKKAMSQQSKLADKLRPI
ATSGEGGGELDLVVVGCGPAGLALAAESAKLGLSVGLIGPDLPFTNNYGVWEDEFKDLGL
DGCIEHVWRDTIVYLNDNDPILIGRSYGRVSRYLLHEELLRRCVESGVSYLSSKVERITE
ATDGHSLVACEHGIVVPCRLATVASGAASGKLLQYEVGGPRVSVQTAYGVEVEVENNPYD
PSLMVFMDYRDYIKQKVQCLEAEYPTFLYAMPMSSTRVFFEETCLASKDAMPFDLLKKKL
LSRLEAMGIRVLKTYEEEWSYIPVGGSLPNTEQKNLAFGAAASMVHPATGYSVVRSLSEA
PNYASVIANILNQDHSKGKPILERRYANISMQAWNTLWPLERKRQRAFFLFGLALILQLD
IEGIRIFFHTFFRLPSWMWQGFLSSSLSSADLMLFALYMFVIARNDLRMCLVRHLLSDPT
GATMIRTYLTV
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggaatgcgtgggagctcggaatttcggagcaatgccggctgtgctgctgtcatgtcca
tgtcctgtgtggaggtctaaaacaggagcagcaacacagccacagagtagcagcagtgca
aagcagagtgtttttaaaagtaataaacgattccgtttatgtcaagtgaggtcaggagga
ggtagtaatagtagtcgagggatgaatgatagttgtagtagtgttgctgtcaaagaaggt
atgtttgctgatgaagaggattatattaaagccggtggttctgagcttggttttgtacaa
atgcagcgaaaaaaggccatgagtcaacagtctaaacttgccgacaagttgcggccgata
gcaacaagcggagaaggtggaggagaactggatttggtggtggttggttgtggtccagca
ggattagctttagctgcagaatcagctaagttggggttaagtgttggacttattggtcct
gatcttccttttactaataattatggtgtttgggaggatgaatttaaagatcttggactt
gatgggtgtattgagcatgtttggcgggataccattgtatatcttaacgacaatgatccc
attctgatcggtcgctcctatggacgagttagtcgatatttgctccatgaagagttgttg
aggaggtgtgtcgagtcaggtgtttcatatctgagctcaaaagtggaaaggattaccgaa
gcaactgatggtcatagtcttgtagcttgtgaacatggcattgtagttccatgcaggctt
gctactgttgcatctggagctgcttcgggaaaactcttgcagtatgaggtgggaggtcca
agggtttctgtgcaaacagcttatggtgtggaagttgaggtggaaaacaatccatatgat
cctagcctaatggttttcatggattacagagactacattaaacaaaaagttcaatgttta
gaagctgaatatccaacatttctttatgcaatgcccatgtcgtcaacaagagttttcttt
gaggaaacttgtttggcctcaaaagacgcgatgccttttgacttgttaaagaaaaagctc
ttgtcaaggttagaggccatgggaatccgagtcttgaaaacctatgaagaggaatggtct
tatattccagttggtggttccttgccaaatactgagcaaaaaaatcttgcatttggtgct
gctgctagcatggtgcatccagccacaggctattcagtggtgagatcattgtccgaggct
ccaaattatgcttccgtaattgcaaatatattgaatcaggatcattctaagggaaagcct
attcttgaaagacgttatgcaaatatatcaatgcaagcttggaatactctttggccacta
gagagaaaacgtcaaagggcattctttctctttggactagcacttatattgcagctggat
attgaaggcatcagaatatttttccataccttcttccgcttacccagctggatgtggcag
ggatttcttagctcctctctctcctcagctgatctcatgttatttgccttgtatatgttt
gttattgcacgaaatgatttgagaatgtgccttgtcaggcacctgctttccgatccaaca
ggagcaactatgataagaacttatctgacagtgtag
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