Populus alba (white poplar): 118049212
Help
Entry
118049212 CDS
T07314
Name
(RefSeq) transcription factor BHLH42 isoform X1
KO
K28363
basic helix-loop-helix transcription factor family protein
Organism
palz
Populus alba (white poplar)
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
palz03000
]
118049212
Transcription factors [BR:
palz03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
118049212
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH-MYC_N
bHLH-TF_ACT-like_plant
HLH
bHLH_IRO3
bHLH_SAC51
ACT_ACR9_3rd
ACT_4
BUD22
Motif
Other DBs
NCBI-GeneID:
118049212
NCBI-ProteinID:
XP_034915036
LinkDB
All DBs
Position
2:complement(4061045..4067158)
Genome browser
AA seq
700 aa
AA seq
DB search
MAAPLSSRLQTMLQAAVQSVQWTYSLFWQMCPQQGILVWGDGYYNGPIKTRKTVQPMEVS
TEEASLQRSQQLRELYDSLSIGETNQPERRPCAALSPEDLTETEWFYLMCVSFSFAPGAG
LPGKAYDRKQHVWLTGANDIDSKTFSRAILAKSAGVQTVVCIPLLDGVVEFGTTDKVKED
LGFIQHVKSFFSDHHHLPPPKPALSEHSTSNPATSSDHPRLYSPPIPPFYVSADPPANAD
QMNEDEEEEEEEDDDDDQDDEEDQESDSEAETSREALLEPCQAQNPLQVAVVEPSELMQL
EMSEGIRLGSPDDGSNNLDLDFPLISPESLMDHQSRADSFRTESARRWAPMLQDNPFSGS
LQPSASGSPPLVDLAQEDTHYSQTVTTILQNQPIELAAEPSLNAYEAYSTESAFAKWMNR
SDHCLNVPFETTSQWLLKYILFTVPYLHSKYREENSPKSRDGDATNKFRKGTPQDELSAN
HVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLLKKIQDLEACNKQME
SEQRSRSVDPPQTITTSTSLKEQDYGVTVADRARSVGPGSDKRKMRIVEDYTTGRAQPKS
VDSLPSPEPMVDVEPEISVEVSIIERDALIELRCGYREGLLLDIMQMLRELRIETIAVQS
SSNNGIFVGELRAKVKENVSGKKLSIVEVKRAIRLIIPHD
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atggctgccccgctcagtagtcgcttgcagactatgctgcaggccgcggtgcaatctgta
caatggacttacagtctgttttggcaaatgtgtcctcaacaagggatcttagtgtgggga
gatgggtattacaatggaccaatcaagactagaaaaacagtgcagccaatggaggttagt
actgaagaagcctccttgcaaaggagccagcagcttagagagctctacgattcattgtct
ataggagagaccaaccagccagaacggaggccttgcgctgccttgtcaccggaagactta
acggagactgaatggttttatctgatgtgtgtgtccttctctttcgctcctggtgctggg
ttaccaggaaaggcctacgataggaaacaacatgtgtggcttacaggtgcaaacgatatt
gatagcaaaactttctctagagctatccttgccaagagtgctggagttcagactgtggta
tgcatccctctccttgatggcgtggttgaatttggaacaaccgacaaggtgaaagaggat
cttgggtttatccaacacgtaaaatcctttttcagtgaccaccaccaccttcctccccca
aaaccagctttatcagagcactccacttccaaccctgccacctcatcagaccatcctcgc
ttatattctccacccatccctcccttctatgtgtctgcagacccgccagccaatgcggac
caaatgaatgaggatgaagaagaggaagaagaagaagatgatgatgatgaccaggatgat
gaagaggaccaggagtcagactcagaagctgaaaccagtcgcgaagctctcttagaaccg
tgtcaggctcaaaaccctcttcaagtggcagtagttgagccgagcgagttgatgcaactt
gagatgtctgagggtatcaggcttggttctcctgatgatggatctaataatttggacttg
gattttcctctgattagcccagagagcctgatggatcaccagagccgagctgactcgttt
agaacggagtctgcccggaggtgggcgccaatgttgcaagacaaccctttcagtggtagc
cttcaaccatcagcttcaggatcgcctccgctagtagacttggcgcaagaggacacgcac
tactcccaaactgtcaccaccatcctccaaaaccagccaattgagcttgcagcagagcca
tcgctaaatgcatacgaggcatactccaccgaatcagcttttgccaagtggatgaaccgc
tcggatcactgcctcaacgtaccattcgagaccacctcccaatggctactaaagtacatt
ctatttaccgtaccataccttcacagcaaataccgggaagaaaattccccaaagtcacgt
gacggtgacgcaaccaataagttccgcaaggggaccccacaagatgagctcagtgccaat
cacgtgctggccgaacgacgccgtagagagaagttaaacgagaggttcataatattaagg
tcactagtgccattcgtgaccaaaatggataaagcatcaatattaggggacacgattgaa
tacgtgaagcaattacttaagaaaattcaggatctggaggcgtgtaataaacagatggag
agtgagcaacgttcaagatcggtggacccaccacagacgatcactacttccactagtttg
aaagagcaagattatggggtcacagtggcggaccgggctaggagtgttggcccaggatca
gacaagaggaagatgaggattgtggaggattataccactggccgtgcccagcccaaatcg
gtggattcattgccatcgccagagccgatggtcgatgtagaaccggagatcagcgtagag
gtgtcgataatagagagggacgcattgatagagttgagatgtggctacagagaggggctt
ttacttgacataatgcaaatgctgagggagctcaggatagaaaccattgcagtccagtct
tcttcgaacaatgggatctttgtaggggaattgagggccaaggtgaaggagaatgttagt
ggaaagaagttgagcatcgtggaggtgaagagggcaatacgtctaataataccccatgat
tga
DBGET
integrated database retrieval system
