Populus alba (white poplar): 118049984
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Entry
118049984 CDS
T07314
Name
(RefSeq) transcription factor PIF1 isoform X1
KO
K16189
phytochrome-interacting factor
Organism
palz
Populus alba (white poplar)
Pathway
palz04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
118049984
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
palz03000
]
118049984
Transcription factors [BR:
palz03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
118049984
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
118049984
NCBI-ProteinID:
XP_034916065
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Position
2:14542368..14548414
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AA seq
577 aa
AA seq
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MNPYVPDFEMDDDYPLPPPPSTHTRPRKPAMQEEEIMELLWQNGQVVMHSQRSQKKSSSP
PSKLDDAVLPADQLPGTKEIRSSHDQQQEHHHLFMQEDEMASWLNHPLNDTNFDHDFCAD
LLYPSTASTASITREAAVTNAAASPVRGATQRTEARSYPGLYAAVSAPRPPIPPVRRAEV
VQNFAYFSRHRARGVSESGPSNSKSVVRESTVVDSCETPTARISETAFARSVDNTCGTMN
GAAVAGTVSSAPSSNREMMTNPCEMTSTSSPDCSSASAEPPALMSPVEDRKRKGREEEAE
CHSEDAEFESADANKQIRGSMSSKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS
DKASMLDEAIEYLKSLQLQVQMMSMGCSMVPMMFPGFQQYMPPMGIGMGMGMEMGLSRPM
MPFPNILAGAPSATPAAAAHLVPRFPVPPFHVPPIPAPDPSRVQPANQVDPMLGSPGHQN
PSQPRVPNFVDPYQHYLGLYQMQLPGVPQNQAMVQPSTTKPSTSRGAENLGNHQSGCDGE
KKRLMLFLQVSQAKKQEWKMGKGINGVMLRGCPSLSQ
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgaatccttatgttcctgattttgaaatggacgatgattaccctctcccacctcctcct
tcaacccatactcgccccagaaaaccagccatgcaggaagaagagatcatggagctacta
tggcagaacggccaagtagtgatgcatagtcaaagatctcaaaagaaatcatcttctcca
ccgtccaagttggatgatgcggtgctcccagctgatcaattacctggtactaaagagatc
cgatcatcacatgatcaacaacaagaacatcatcatctttttatgcaagaagatgagatg
gcttcttggcttaaccatcctctaaacgacaccaatttcgaccatgatttctgcgccgat
ttgctatatccttcgacagcttccaccgcttccatcaccagggaagctgctgtcaccaac
gccgcggcgtctcctgttcgaggtgcgactcagagaacggaagctaggagttatcctggg
ctttatgcggcggtatcggcgccgaggccgccgataccgccggtgaggagagcggaggtg
gtgcagaacttcgcgtacttctcgaggcaccgagcgagaggtgtttcggaatctggaccg
tctaattcgaagagcgtggtgagggaatcgacggttgttgactcgtgtgagactccaaca
gcgagaatttcggagacggcgtttgctagaagtgtggataacacgtgtgggaccatgaac
ggcgctgctgtagcagggacggtttctagtgctccctcaagtaatagagagatgatgacg
aatccttgtgagatgacctcgacgtcatcacctgattgctcgagtgctagcgctgagccg
ccggctctgatgtctccagtggaagaccggaagcggaagggaagagaagaggaagctgag
tgccatagcgaggatgctgagtttgaatctgctgatgcaaataaacaaattcgtggatca
atgtcatcgaagagatctcgtgcagcagaagttcacaacctatcggaaaggagacgccga
gatcggatcaatgaaaagatgagggccttgcaagagctcatacctcgttgcaacaagtcg
gacaaagcttctatgttagatgaggcaattgagtacctgaaatcgcttcagttgcaagta
cagatgatgtctatgggatgcagcatggtccccatgatgtttcctggcttccagcagtac
atgccgccaatggggatagggatgggcatgggcatggaaatgggattgagtaggccaatg
atgccatttcccaatattttggcaggtgcaccctcagcaacaccagctgcagcagctcat
ttggtccctaggttccctgtgccgccctttcatgtgccccccatccctgctcctgatcca
tccagagtccaaccagccaaccaggtagatcctatgctaggctcaccaggtcaccagaat
ccaagccaaccacgagtcccaaattttgttgatccatatcagcactatcttggcctctac
cagatgcagttaccaggagtaccacagaaccaagctatggttcagccaagtaccaccaag
ccaagtactagtcgaggagctgagaatcttggcaatcaccagtcaggttgtgatggggaa
aaaaaaaggctcatgcttttccttcaagtcagtcaggctaaaaaacaggagtggaaaatg
gggaaaggaataaatggagttatgctacgtggttgtccatctttatctcaatag
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