KEGG   Populus alba (white poplar): 118051202
Entry
118051202         CDS       T07314                                 
Name
(RefSeq) GTP-binding nuclear protein Ran-3 isoform X1
  KO
K07936  GTP-binding nuclear protein Ran
Organism
palz  Populus alba (white poplar)
Pathway
palz03008  Ribosome biogenesis in eukaryotes
palz03013  Nucleocytoplasmic transport
palz03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:palz00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    118051202
   03008 Ribosome biogenesis in eukaryotes
    118051202
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    118051202
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:palz03019]
    118051202
   03009 Ribosome biogenesis [BR:palz03009]
    118051202
   03016 Transfer RNA biogenesis [BR:palz03016]
    118051202
   03036 Chromosome and associated proteins [BR:palz03036]
    118051202
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:palz04147]
    118051202
   04031 GTP-binding proteins [BR:palz04031]
    118051202
Messenger RNA biogenesis [BR:palz03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     118051202
Ribosome biogenesis [BR:palz03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    118051202
  Pre-60S particles
    118051202
Transfer RNA biogenesis [BR:palz03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    118051202
Chromosome and associated proteins [BR:palz03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     118051202
   Spindle formation proteins
    118051202
Exosome [BR:palz04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   118051202
GTP-binding proteins [BR:palz04031]
 Small (monomeric) G-proteins
  Ran Family
   Ran
    118051202
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 RNA_helicase GTP_EFTU Pox_A32 ATPase AAA_24 ArgoMid Septin AAA_22 AAA_7 AAA_16
Other DBs
NCBI-GeneID: 118051202
NCBI-ProteinID: XP_034917677
LinkDB
Position
18:2529759..2532725
AA seq 221 aa
MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG
KIRFYCWDTAGQEKFGGLRDGYYIHGNCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFV
ETPALAPPEVPIDLVAQAQHEAELAAAASQPLPDDDDDAFE
NT seq 666 nt   +upstreamnt  +downstreamnt
atggctttgccgaatcagcaaactgttgattatccaagcttcaagcttgtgattgttggc
gatggtggtacagggaaaacaacatttgtgaaaaggcatctgactggcgagttcgagaag
aaatatgagcctactattggtgtggaagttcatcctttggatttcttcaccaactgtggt
aaaattagattctattgctgggatacagccggtcaagagaagtttggtggtcttagagat
ggatactacatccatggtaattgtgctataatcatgtttgacgttactgctcggttgaca
tacaagaatgttcctacatggcatagggatctttgcagggtctgcgaaaacattcctatt
gttctttgcggaaacaaggtggatgtaaagaacaggcaggtgaaggcaaagcaggttacc
tttcacaggaagaagaacctgcaatactatgagatttcagctaagagcaactataatttt
gagaagccattcttgtaccttgctagaaaacttgctggggatcctaacttgcattttgtt
gagactccagccttggctcccccagaagtgccaattgaccttgtagcacaagcacagcat
gaagccgaacttgctgctgctgctagccaacctcttccagatgacgatgatgacgcgttt
gagtaa

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