Populus alba (white poplar): 118052698
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Entry
118052698 CDS
T07314
Name
(RefSeq) uncharacterized protein isoform X1
KO
K12173
BRCA1-A complex subunit BRE
Organism
palz
Populus alba (white poplar)
Pathway
palz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
118052698
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
palz04121
]
118052698
03036 Chromosome and associated proteins [BR:
palz03036
]
118052698
03400 DNA repair and recombination proteins [BR:
palz03400
]
118052698
Ubiquitin system [BR:
palz04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
118052698
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
BRISC complex
118052698
Chromosome and associated proteins [BR:
palz03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
118052698
DNA repair and recombination proteins [BR:
palz03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
118052698
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE
Motif
Other DBs
NCBI-GeneID:
118052698
NCBI-ProteinID:
XP_034919597
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Position
2:1577337..1580967
Genome browser
AA seq
379 aa
AA seq
DB search
MPFDGFSPLISSQLQYLLNHSPRTIQIEQAWSGTRYFTGSLDRFTLLIPYCLDYIKWDII
YNAEFPLAAPDVIFGPEDDGFHPFLVVGREEGDSRLVKNSLTDWNNKDPTRLLALVMELR
DKYRSYQERRVGEVDDDRLKFEISTIVSREGIEMHMSSGVEKPGEVKFAVPLMDMNINKM
VLGCPWSHPQKIYLQVIYPVGRKYAPATSAPRLKLMCAPELKALFSIDEVKLPAWLDGMC
MAEYLPRLEELLQRQVSEAVMLIDVRRQFIEALSPVIGRPLEADPVFCRKASFLVCSGPF
TFLVHFFLSTHFPKQRPSLMFQSIQHFNSLGMPVKSPLITEYLWSPRWEPSQMAERISDF
LVDESLNFKRHCNESQLQH
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgccatttgatggattctctcctctcatctcgtctcaactccagtacctcctcaatcac
tctcctcgcacgatccagattgagcaggcttggtcaggcaccaggtactttactggaagt
cttgatcgattcacattgctcattccctactgtctagactacataaaatgggatattata
tacaatgctgaatttccattagctgcgccggatgttatatttggtcccgaggatgatggt
ttccatccatttcttgtcgtaggaagagaggaaggggattcgaggctagttaagaacagt
ttgactgattggaacaataaagatcctacacggctgttggctctcgtaatggaattgagg
gataaatataggtcttaccaggagagacgcgtgggagaagttgatgatgataggttgaag
tttgaaattagtactattgtatctagggagggaattgaaatgcatatgagttctggtgtt
gaaaagccaggggaggttaaatttgctgtgcctttaatggacatgaatataaataaaatg
gtgcttggatgcccctggagtcatccacaaaagatttacttacaggttatttatcctgtt
ggtagaaagtatgcacctgctacttcagcacctcgtctgaaattaatgtgcgctcctgag
ttgaaagccctgttttctattgatgaagtcaaacttcctgcatggttggatggaatgtgc
atggctgaatatcttccccgcctggaagaactccttcagagacaggtctcagaggcagtt
atgttaattgatgttagaaggcagtttattgaggcattatctccagtaattggaaggcca
ctagaagctgatccagtcttctgcagaaaggcttcatttcttgtctgttctggaccattt
acattcctggtgcattttttcctctcaactcactttccaaaacagcggccttctctaatg
tttcaaagtattcagcatttcaattcccttggcatgccggtcaagtcgcctctcattaca
gagtatctatggagtcctagatgggaaccctcacaaatggctgagcggatctctgacttt
ttggtggatgaatctctaaatttcaaaaggcactgcaacgaatctcaacttcaacactag
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