Populus alba (white poplar): 118055014
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Entry
118055014 CDS
T07314
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic isoform X2
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
palz
Populus alba (white poplar)
Pathway
palz00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
118055014
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
palz01007
]
118055014
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
palz03016
]
118055014
Enzymes [BR:
palz01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
118055014
Amino acid related enzymes [BR:
palz01007
]
Aminoacyl-tRNA synthetase
Class I (U)
118055014
Transfer RNA biogenesis [BR:
palz03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
118055014
Prokaryotic type
Other AARSs
118055014
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
HVO_A0114
Motif
Other DBs
NCBI-GeneID:
118055014
NCBI-ProteinID:
XP_034922702
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All DBs
Position
17:5480820..5494871
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AA seq
1180 aa
AA seq
DB search
MEEVCEGKEFSFPTQEEKILSFWSEIKAFETQLERTKDLPEYIFYDGPPFATGLPHYGHI
LAGTIKDIVTRYQTMTGHHVTRRFGWDCHGLPVEAEIDKKLGIKRRDEVLKLGIDKYNEE
CRGIVTRYVGEWEKVVVRVGRWIDFKNDYKTMDLKFMESVWWVFSKLFEKGLVYKGFKVM
PYSTGCKTVLSNFEVQQNYKDVPDPEIMVTFPIVDDPHNAAFVAWTTTPWTLPSNLALCV
NGNFDYIKVRNKYTGKVYVVAECRLSALPVEKPKSTANGPAGGSKTSNSKTKSGKAENLM
DSYDLLEKVKGNELVNKKYEPLFNYFMEFSDTAFRVVADDYVTDDSGTGIVHCAPAFGEE
DYRVCIGNQILTKENLIVSVDDDGCFIEKITDFSGRYVKDADKDIIEAVKAKGRLVKSGS
FMHSYPFCWRSDTPLIYRAVPSWFIRVEEIKEQLLENNKQTYWVPDYVKEKRFHNWLENA
RDWAVSRSRFWGTPLPVWMSDDGEEVIVMDSIAKLEKLSGVKVFDLHRHNIDHITIPSSR
GPEFGVLRRVEDVFDCWFESGSMPYAYIHYPFENVELFEKNFPGHFVAEGLDQTRGWFYT
LMVLSTALFGKPAFRNLICNGLVLAEDGKKMSKSLKNYPSPMEVIDDYGADALRLYLINS
PVVRAETLRFKKEGVFSVVKDVFLPWYNAYRFLVQNAKRLEVEGLAPFTPIDAATLQKSS
NVLDQWINSATQSLVHFVHQEMNAYRLYTVVPYLLKFLDNLTNIYVRFNRKRLKGRTGEE
DCRTALSTLYNVLLISCKVMAPFTPFFSEGLYQNMRRVCTGSEESIHYCSFPQVEGERNE
RIEQSVARMMTIIDLARNIRERHNKPLKSPLREMIVVHPDVDFLDDIAGKLKEYVLEELN
VRSLIPCNDTLKYASLRAEPEFSVLGKRLGKSMGAVAKEVKAMSQIDILEFEKAGEVTIA
SHCLKLSDIKVVREFKCPDGLTDREVDAAGDGDVLVILDLRLDESLLEAGVAREVVNRIQ
KLRKKTGLEPTDAVEVYFESLDEDKSISQQVLNSQELYIRDAIGSPLLSSTFMPPHAVIL
GEESFHDISKLSFTIYLARPALVFKSDAILSLYGGNTKSVHGLETYLLSRDHSNLKSEFQ
LGDGKITVDAIEGLPAVNVVLGEHVFLTVGDSVLSTKGGR
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagtctgtgaaggaaaagaattctcctttccaacgcaagaagaaaagatcctg
tccttctggtcagaaatcaaagcctttgaaacccaattagaacgcaccaaagacctccct
gaatacatcttctacgacggtccaccgttcgccaccgggttacctcactatgggcacatt
ttagccggtacaatcaaagatattgtgaccagataccagacgatgacagggcaccatgtc
acacgtcgttttggatgggattgccatggattgccagttgaagctgagattgataagaaa
ttagggattaagagaagggatgaggtgttgaaattggggattgataagtacaatgaggag
tgtagagggattgttacaaggtacgtgggggaatgggagaaagttgttgttagagttggg
agatggattgattttaagaatgattataagaccatggatttgaagtttatggagagtgtt
tggtgggttttttccaagttgtttgagaaagggcttgtttacaagggttttaaggtcatg
ccttacagtacaggttgcaaaactgtgctgtcaaattttgaagttcagcagaattataag
gacgtacctgatcctgagataatggtcacatttccaattgttgatgatccacacaatgca
gctttcgttgcttggacaacaacgccatggactcttcccagtaatcttgccctttgtgtt
aatggaaattttgactatatcaaggttcgtaacaagtacactggaaaagtctatgtcgtt
gctgaatgtaggctgtcagcacttcctgttgagaagccaaaatcaactgcaaatggacct
gctggtggttcaaagacatcaaattctaaaactaagagtgggaaggctgaaaacttgatg
gattcttatgatttgttggagaaagtcaagggcaatgagttggtgaataagaagtatgag
ccgctattcaattacttcatggagttctctgacactgcatttagagttgttgccgatgat
tatgtgactgatgacagtggtactggcattgttcactgtgctcctgcatttggtgaagag
gattaccgtgtttgcattgggaatcaaatactcacgaaggagaatttgattgtatctgtt
gatgatgatggctgcttcattgaaaaaattactgatttcagtgggcgctatgtcaaggat
gcagacaaggatatcattgaagcagtgaaggcaaaaggcaggcttgttaagtctgggagc
tttatgcattcctatcccttctgttggagatctgatacacctctcatttatagagctgtt
ccaagctggtttattagagtggaagaaataaaagagcaactgttggaaaacaacaaacaa
acatactgggttcctgattatgtaaaggagaaacggtttcacaactggcttgaaaatgct
agagactgggcagttagtagaagtcgattttggggcactcctctacctgtatggatgagt
gatgatggtgaagaagtaatagtcatggattctattgctaaacttgagaagctttctggt
gttaaggtgtttgatctccatcgtcataatattgatcacatcacaatcccatccagtcga
ggtcctgaatttggtgtacttcgacgtgttgaggatgtatttgattgttggtttgagagt
gggtcgatgccttatgcttatatccattacccatttgagaatgttgaactttttgagaaa
aattttcctgggcattttgtggctgaagggctagatcaaactcgtggatggttctatact
ctcatggtattgtctactgcattatttgggaagcctgcatttaggaatctcatttgcaat
ggacttgtcctggctgaggatggaaagaagatgagtaaaagtttgaaaaattatccatca
cctatggaagttattgatgattatggagctgatgcattacgattatacctgataaactct
ccagttgtgcgtgcagagaccttgcgtttcaaaaaggaaggtgtttttagtgttgtcaag
gacgtgttcctcccgtggtacaatgcttaccggttccttgtacagaatgcaaagaggcta
gaggttgaagggcttgcaccatttactcctattgatgctgcaactcttcaaaagtcatcc
aatgtgcttgatcagtggataaactcagctacccagagtcttgttcattttgttcaccaa
gaaatgaatgcataccgcctttacacggtggtaccttatctcttgaagtttctggacaac
cttacaaatatttatgtgcgattcaaccgcaaaagattaaaaggtcgtactggggaagaa
gactgccggacagctttatcaactttatacaatgttcttttaatatcatgtaaggtgatg
gcaccattcacacctttcttttcagaaggtctgtatcaaaatatgcggagagtttgtact
ggatcagaggaaagtattcactattgcagctttcctcaagtagagggggagaggaatgaa
cggattgaacagagtgttgcaagaatgatgaccattattgatcttgcacgcaatatccgt
gaacggcacaacaagcctcttaaatcgccattaagggagatgattgtagttcatcctgat
gtggactttcttgatgacatagctggaaaattgaaggagtatgtgctcgaggaactcaat
gtgagatctcttattccatgtaacgatactctgaaatatgcttctttgcgtgcggagcct
gagtttagcgtgttaggtaagcgacttggaaaatctatgggggctgttgccaaagaagtt
aaagcaatgtctcagatagatattttggaatttgagaaagctggggaagttaccattgct
tcacattgtctgaaactgtctgatattaaggttgttcgggaattcaaatgccctgatggt
ttgacagatagggaggttgatgctgctggagatggtgatgttttggtaatattagatttg
cgtctggatgagtcattattagaggctggtgttgctcgtgaggttgtgaatagaattcag
aaattgaggaaaaaaactggacttgaacctacagatgcggttgaggtttactttgaatct
ctggatgaagataaatcaatctcccagcaggtcttgaattcacaggaactctatattagg
gatgcaattggttccccattgctttcttctacatttatgccaccacatgcagttatactt
ggtgaggagagtttccatgacatttccaagctgtccttcaccatatatttggcaaggccg
gcactagttttcaaatctgatgccattctttcgttgtatggaggaaatacaaaatctgtc
catggtctagaaacttacttgctatcaagggatcattctaatttgaaatctgaatttcaa
cttggagatggaaagataactgttgacgccattgaaggcctccctgctgtaaatgtggta
ttgggagaacatgtgtttttgactgttggtgactccgttttaagcacaaaaggtgggcga
taa
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