Populus alba (white poplar): 118060868
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Entry
118060868 CDS
T07314
Name
(RefSeq) transcription factor PIF3 isoform X1
KO
K12126
phytochrome-interacting factor 3
Organism
palz
Populus alba (white poplar)
Pathway
palz04075
Plant hormone signal transduction
palz04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
118060868
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
118060868
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
palz03000
]
118060868
Transcription factors [BR:
palz03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
118060868
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
118060868
NCBI-ProteinID:
XP_034930046
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Position
13:complement(88374..93845)
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AA seq
714 aa
AA seq
DB search
MPLSELLYRMAKGKTDSSQEKNPACSPDLSFVRPENDFGELIWENGQIQYSRARKIQTCN
SLPPKIRDKDIGNGTNTKTGKFGTMESTLNELLAVPAVEVRANQDDDMVPWLNYPLDESL
QHDYCSDFLPELSGVTVNEHSSQSNFPSFNKRSCNQSITDSHTVSVHNGLSLEQGDVVMN
SSAGDIEANRPRTSASQLYPSSSEQCKISFPFFRSRDSTKKDGSTSNAVHHVIAPDSIRA
PTSGGGFPSIKMQKQVPEPSPINSSLMNFSHFARPAALVKANLQDVGMRASSGTSIMERA
QNKDKGSIGLPKETGSHCRPNMMPSKVEVKPTEVKPAEGSVPAELPEEMSQEGDSKSDRN
CHQNFGESAIKGLADVEKTTEPLVASSSVGSGNSTERPSDDPTENLKRKHRDTEESEGPS
EDVEEESVGAKKPASARAGNGSKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVD
KASMLDEAIEYLKTLQLQVQIMSMGAGMYMPSMMLPPGMPHMHAAHMGQFLPMGIGMGMG
FRMGMPDMNSGYSGCPMYHVPPMHGAHFPGSPMSGPSALHGMGGPSLQMFGLSGQGLPMS
FPRAPLMPMSGGPPPKTNREPNACGVVGPMDNLDSATASSSKDAIQNTNSLVMQNNVANR
SMDQTSSQCQATNECFEQPAFVQNNGEGSEVAESGVLKSAGGTDIIPSRATGCD
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgcctttgtctgagctcctatatcgaatggctaagggaaaaactgattcttctcaagag
aagaatcctgcttgttcacctgatctgtcttttgtcagacctgagaatgattttggtgag
ctaatatgggaaaatggtcagattcaatacagtagagctagaaagatacaaacttgtaac
agcttacctcccaagattagagataaagacataggaaatggcaccaatactaaaacaggg
aagtttggaacgatggagtctacactgaatgaactccttgcggttcctgctgttgaagtg
agggcgaatcaagacgatgacatggtaccttggttgaattatccattggatgaatctctg
caacatgattattgttctgattttttgcccgaattatcgggggttactgtaaatgaacac
tcctcccagagtaattttccatcgtttaataaaagaagttgtaaccagtcaattacggac
tcccatactgtttcggtacacaatggtttgagcttagagcaaggagatgtggtgatgaat
tcttcagcaggagatattgaagcaaataggcctagaaccagtgctagtcagttatatccg
tcatcttctgagcaatgcaaaatatcatttccgttttttagatccagggattcaactaaa
aaagatggtagtacaagcaatgctgtccaccatgtcattgcaccagattctattcgagct
ccaacatcaggaggtggttttcccagcataaagatgcagaagcaagttccagaaccatcc
cctatcaactccagtttaatgaatttctctcactttgcaagaccagctgctcttgtaaaa
gctaatcttcaggacgttggcatgagagctagttcaggaacttcaatcatggaaagagcg
caaaataaagataagggctcaattggtttaccaaaggaaacaggctcccattgccgtcct
aatatgatgccatccaaggttgaggttaaaccaacagaggttaagcctgctgaaggatct
gttcctgctgagctacctgaggaaatgagccaagaaggtgactctaaaagcgatagaaac
tgtcatcaaaattttggtgaaagtgcaattaaaggattagcagatgttgaaaagactaca
gagcctttggttgcttcttcttctgttggttcgggcaatagcacagagagaccttctgac
gacccaactgagaatctgaagagaaaacatcgtgatactgaggagtctgaaggtcctagt
gaagatgttgaagaagaatcagtaggtgcaaaaaaaccagcttctgctcgagcaggtaat
gggtccaagagaggtcgggcagcagaagttcataacttatctgaaaggaggcgaagggat
aggatcaatgagaagatgcgagccctacaagaactcataccaaactgcaataaggtggat
aaagcttcaatgcttgatgaggccattgaatatttaaagacgcttcagcttcaagtacaa
attatgtcaatgggagctggaatgtacatgccatcaatgatgttacctcctggaatgcct
cacatgcatgcagctcatatggggcagttcttacccatgggcattggaatgggaatgggt
ttccggatgggtatgcctgacatgaatagtggatattctggttgccctatgtatcatgta
cctcctatgcatggagcacatttccctggctcgccaatgtcagggcctagtgctttgcac
gggatgggaggacctagtcttcagatgtttgggctttctggtcaaggacttccaatgtca
tttcctcgtgcacccttaatgccaatgtctggagggccgcctccaaaaacaaacagggaa
ccaaatgcttgtggagtggtaggtcctatggataatttggattcagctacagcctctagt
tcaaaggatgcaattcagaataccaactcgctagtgatgcagaacaatgttgccaatagg
tcaatggatcagacctctagtcagtgccaagcaacaaatgaatgttttgaacagcctgct
tttgtgcaaaataatggtgaaggctcagaagttgctgaaagtggagtgttgaagtcagct
ggcggaactgacatcatacctagtagagcaactggttgtgactga
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