KEGG   Populus alba (white poplar): 118062236
Entry
118062236         CDS       T07314                                 
Name
(RefSeq) sm-like protein LSM3B
  KO
K12622  U6 snRNA-associated Sm-like protein LSm3
Organism
palz  Populus alba (white poplar)
Pathway
palz03018  RNA degradation
palz03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:palz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    118062236
  09123 Folding, sorting and degradation
   03018 RNA degradation
    118062236
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:palz03019]
    118062236
   03041 Spliceosome [BR:palz03041]
    118062236
Messenger RNA biogenesis [BR:palz03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     118062236
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     118062236
Spliceosome [BR:palz03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    118062236
 Complex C
  U2 snRNP components
    118062236
SSDB
Motif
Pfam: LSM TIG_SUH Glutaredoxin
Other DBs
NCBI-GeneID: 118062236
NCBI-ProteinID: XP_034931863
LinkDB
Position
5:complement(18394326..18396513)
AA seq 97 aa
MASEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVE
IDDETYEEIVRTTRRTVPFLFVRGDGVILVSPPLRTA
NT seq 294 nt   +upstreamnt  +downstreamnt
atggcaagcgaagaagagagtgcggtaaaagaaccattggatctcatcagacttagcctg
gacgagcgtatctacgtcaagctccgctctgatcgtgagcttcgcggcaaacttcacgct
tatgatcagcatttgaatatgattcttggggatgttgaagaaattgttactacagtagaa
atcgatgatgaaacctatgaagagattgttcggactacaaggcgcacagtgcccttcctg
tttgttagaggagatggtgtcatattggtctctcctccattgaggacagcttaa

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