Pantoea ananatis LMG 20103: PANA_3070
Help
Entry
PANA_3070 CDS
T01195
Symbol
ygcF
Name
(GenBank) YgcF
KO
K10026
7-carboxy-7-deazaguanine synthase [EC:
4.3.99.3
]
Organism
pam
Pantoea ananatis LMG 20103
Pathway
pam00790
Folate biosynthesis
pam01100
Metabolic pathways
Module
pam_M00988
PreQ1 biosynthesis, GTP => 7-Aminomethyl-7-deazaguanine
Brite
KEGG Orthology (KO) [BR:
pam00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00790 Folate biosynthesis
PANA_3070 (ygcF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pam03016
]
PANA_3070 (ygcF)
Enzymes [BR:
pam01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.99 Other carbon-nitrogen lyases
4.3.99.3 7-carboxy-7-deazaguanine synthase
PANA_3070 (ygcF)
Transfer RNA biogenesis [BR:
pam03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
PANA_3070 (ygcF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
Fer4_12
Motif
Other DBs
NCBI-ProteinID:
ADD78237
UniProt:
D4GLI4
LinkDB
All DBs
Position
complement(3442097..3442768)
Genome browser
AA seq
223 aa
AA seq
DB search
MQYPINEMFQTLQGEGYYTGVPAIFIRLQGCPVGCSWCDTKHTWEKQADRETSLGDILVK
TVESDAWGNADTATLLSSIAQQGWTARHAVITGGEPAIYDLRPLTASLEAAGFQCQIETS
GTHEIHCSEQTWVTVSPKVNMRGGYDVLAQALSRADEIKHPVARQRDVEALDDLLAGIQD
SKARIIALQPISRKDEATKLCIETCIARNWRLSMQTHKYLNIA
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgcagtacccgattaacgaaatgttccagacgctgcaaggcgaaggttattacaccggc
gtgccggctattttcatccgcttacagggatgtccggtaggatgcagttggtgtgacacc
aaacacacctgggaaaaacaggcggatcgggaaacatcactaggcgatattctggtcaaa
acggtggaaagcgatgcctggggcaacgccgatacggcgacgctgctcagcagcatcgcg
caacagggctggacggcccgtcatgcggtgatcactggcggcgaaccggccatttacgat
ttacgcccgctgaccgcatcgctggaggcggcaggatttcaatgccagattgaaaccagc
ggaacccatgaaatccactgttccgaacaaacctgggttaccgtttcacccaaggtaaat
atgcgcggcggatacgacgtgctggctcaggccctgagccgtgcggatgaaatcaaacat
ccggttgcccggcaacgtgatgtggaggcgttagacgacctgctggctggcattcaggac
agcaaagctcgaatcattgcgctgcagccaattagccgcaaagatgaggcgacaaaactt
tgtattgagacctgtattgcgcgcaactggcgcctgtcgatgcagacacataaatatctg
aacatcgcctga
DBGET
integrated database retrieval system
