Periplaneta americana (American cockroach): 138691304
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Entry
138691304 CDS
T10946
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
pame Periplaneta americana (American cockroach)
Pathway
pame03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pame00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138691304
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pame03041
]
138691304
Spliceosome [BR:
pame03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
138691304
Complex C
U5 SnRNP specific factors
138691304
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
MMR_HSR1
EF-G_D2
Motif
Other DBs
NCBI-GeneID:
138691304
NCBI-ProteinID:
XP_069669261
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Position
16:complement(36883954..36910791)
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AA seq
972 aa
AA seq
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MDADLYDEFGNYIGPELESDEEEEEGFGDGEPEAQEYDDEAGEDQGEEMDTTPMTVVLHE
DKRYYPAALEVFGPEVETIVQEEDNQPLDKPLIAPIKKKKFQLKEQDLPETVYNMEFLAD
MMDNPNLIRNVALIGHLHHGKTTFVDCLIRQTHPGFRSTEERNLRYTDTLFTEQERGVGI
KAIPVTLVLPNVKNKSYLINVFDTPGHVNFSDEVTAAKRICDGVVLFVDAAEGVMLNTER
LLKHAVQEKLAIAVCINKIDRLMLELKLPPQDAYYKLRHIVEEINGLLSLYTDDENLKIV
SPILGNVCFASSQYGVCFTLKSFANIYAQTYDGINVSEFARRLWGDIYFNSKTRKFTKKS
PHGSAQRSFVEFILEPLYKIFAQVVGDVDTTLPAVLDELGIKLSKEEMKINIRPLLRLIC
NKFLGDFSGFVDMCVQHIPSPVDNAKLKVQHIYTGPLDSDLAEDMCNCDPEGHLMVHSTK
MYPTEDCTFFQVLARVMSGTLHAGQEVRVLGENYTLADEEDSRILTVGRLWIYEARYKVE
VSRVPAGNWVLIEGIDQPIVKTSTITDLSISDELYIFRPLKFNTQSVIKIAVEPVNPSEL
PKMLDGLRKVNKSYPLLATRVEESGEHIVLGTGELYLDCVMHDLRKMYSEIDIKVADPVV
AFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQISWNKKRLGEFFQT
KYDWDLLAARSIWAFGPDSTGPNILVDDTLPSEVDKGLLSSVKDSIVQGFQWGTREGPLC
EEPIRNVKFKILDAVIAQEPLHRGGGQIIPTARRVAYSAFLMATPRLMEPYLFVEVQAPA
DCVSAVYTVLAKRRGHVTQDAPVPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFCLSV
FHHWQIVPGDPLDKSIVIRPLEPQPATHLAREFMIKTRRRKGLSEDVSINKFFDDPMLLE
LARQDVMLNYPL
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggatgcggacttgtatgatgagtttggcaactacattgggccagagttggagtctgat
gaagaagaagaggaagggtttggagatggagagcccgaggctcaggagtatgatgatgag
gccggggaggaccagggagaggaaatggatacgacacccatgactgtggtgctgcatgag
gacaaacgctactacccagctgcactagaagtgtttgggcctgaggtggagactattgtg
caagaggaagacaaccagccccttgacaagcccctgatcgcaccaattaagaagaagaag
ttccaactcaaggagcaggatctaccagaaacagtttacaacatggagtttcttgctgac
atgatggacaatcctaatctcatccgcaacgttgctctcattggtcacctgcatcatggg
aaaactacatttgttgactgcttgatacggcagactcatcctggctttcgatccacagag
gaacgcaatttgcgatacactgacacactcttcactgaacaggaacgaggagttggcatc
aaagctattcctgttactctggtattgcccaatgtgaagaacaaatcgtacctcatcaac
gtgtttgacactccagggcatgtgaacttttctgatgaagtaacagcagcgaagcgcata
tgtgatggagtggtactgttcgtggatgcagcagagggtgtaatgctgaacactgagagg
ctcttgaagcatgcagtgcaggaaaaactggctattgctgtgtgcatcaacaagattgat
cgattgatgcttgaattgaagctgccaccacaagatgcttactataaattacgtcatatt
gtggaagaaatcaatggcttattgagcttgtacactgatgatgaaaatctgaagatagta
tctcccatcctcggcaacgtatgctttgcaagctcacaatatggtgtgtgctttactctg
aaatcttttgccaatatatatgcacagacatatgatggaatcaatgtcagtgaatttgct
cggcgactctggggagacatttacttcaacagcaaaacgcgcaaatttaccaagaagtct
ccacatggttcagcacagcggagttttgtggagttcattctagagccactgtacaagata
tttgcacaggtggttggagatgtggacacgactttgccagctgtgctggatgaattgggc
atcaaattgagcaaagaggaaatgaagatcaacatcaggcctctgctgagactcatctgc
aataaatttctgggggacttcagtggctttgtggacatgtgtgtgcagcacatcccatcc
cctgttgacaacgccaaactaaaagtgcagcacatatatactggtcctctggattccgac
ctggctgaagacatgtgtaattgtgatcctgaaggccatctgatggtgcacagcactaag
atgtatcccacagaggactgcacgttcttccaagttctggcacgagtgatgagcggtacc
cttcatgctggacaggaggtacgagtgctgggcgagaattacacactggctgacgaggag
gactccaggatcctaactgtaggcaggctatggatatatgaagccaggtataaggtagaa
gtgagtcgtgtgccagctggaaattgggttttaattgaaggtattgaccagcccattgtg
aaaacttccacaatcacagacctcagcatatcagatgagttgtacattttccggcctttg
aagttcaatacacaatccgtcattaaaatcgcagttgagcctgtcaacccatcagagctg
ccaaaaatgttggatggactgcgaaaagtgaacaaatcttaccctctgctggctacgaga
gtggaggaatctggcgagcacattgtgctgggcacaggcgagctgtacctggactgtgtg
atgcacgacctgcgcaagatgtattccgagatagatataaaggtcgcagatcctgtggtg
gcattctgtgaaacagtagtggaaacatcatcactcaaatgttttgcagaaacaccgaac
aaaaagaacaaaatcacaatgattgccgaacctctggagaagggacttgcagaagatatt
gaaaatgaagttgttcaaatttcatggaacaaaaaacgcttgggagagtttttccaaaca
aaatacgactgggatttgcttgcagcccgttctatatgggcatttggacccgattcaaca
ggtcccaacatcctggtagatgacacattgccatcagaggtggataaagggctgctgagc
tctgtgaaggactccatagtgcagggtttccagtggggtactagagagggaccgctatgt
gaagagcccatcagaaatgtcaagttcaagattctagatgcagtgatagcacaggagccc
ttgcacagaggtggaggtcaaataattcccacagccaggcgtgtggcatactctgcattc
ctgatggcgacacctagactgatggaaccctacctgttcgtggaggtgcaagccccagct
gattgtgtgtctgctgtatatactgtcctcgcaaagcgaagaggtcacgtgacccaggat
gcacctgtgcctggctcgccattgtacacaatcaaagccttcattccagcaattgattcc
tttggttttgagacagatctgaggacccacacacaaggacaggccttctgcttgtctgta
ttccatcactggcagattgttcctggagatcctctggacaaaagcattgtcattcgtcca
ctggaaccgcagcctgcaacacacttggcacgtgaattcatgattaagacacgccgccgc
aaaggcttgagtgaggatgtatccatcaacaagttcttcgacgatcctatgttgctggaa
ttggcccggcaagatgtgatgttgaactatcctttgtaa
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