Periplaneta americana (American cockroach): 138701261
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Entry
138701261 CDS
T10946
Symbol
Kdm2
Name
(RefSeq) jmjC domain-containing histone demethylation protein 1 isoform X1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
pame Periplaneta americana (American cockroach)
Pathway
pame03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pame00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
138701261 (Kdm2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pame03000
]
138701261 (Kdm2)
04121 Ubiquitin system [BR:
pame04121
]
138701261 (Kdm2)
03036 Chromosome and associated proteins [BR:
pame03036
]
138701261 (Kdm2)
Enzymes [BR:
pame01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
138701261 (Kdm2)
Transcription factors [BR:
pame03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
138701261 (Kdm2)
Ubiquitin system [BR:
pame04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
138701261 (Kdm2)
Chromosome and associated proteins [BR:
pame03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
138701261 (Kdm2)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
138701261 (Kdm2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
LRR_4
LRR_6
JmjC
F-box
Cupin_8
JHD
LRR_FBXL18
LRR_RPS2
Rubredoxin
Motif
Other DBs
NCBI-GeneID:
138701261
NCBI-ProteinID:
XP_069684072
LinkDB
All DBs
Position
6:40442624..40546667
Genome browser
AA seq
1107 aa
AA seq
DB search
MASTGKKCDGGRSETQREYIIRPRDRKERKHYTDDWALGDEEIEGRRSFRLEDKMESDRF
PQCFVKEMVGPDFNLAYLQRHGFNTPLLFRDKTGLGLRVPSPNFSVNDVRMCVGSRRVLD
VMDVNTQKNVEMSMKEWQRYYDDPNKDKLLNVISLEFSHTKLENYVQTPSLVRQIDWVDV
VWPRHLKEAQTESTNVLDEMMYPKVQKYCLMSVKGCYTDFHVDFGGTSVWYHILKGSKIF
WLIPPTERNIQLYENWVLSGKQSDVFFGDTVDKCGRVTLTAGNTFFIPTGWIHAVYTPID
SLVFGGNFLHSFGIEKQLKTAQVEDTTHVPQKFRYPFFTEMLWYVLERYVHCLLGRSHLD
EGGGGAGSPDSETPKRSNSPQPPENHIHLTPQELHGLKAIVMFLHSLPTNKKNVPELIRD
PIALIKDVRTLVEQHRYDNPEAAVTGKPILRGPDQSDRPRNRGGRLPLTKNSGNRSSTPL
PPGSKQGKHRGSGGKGGQGAGGPRRRRTRCKKCEACQRSDCGDCSFCLDMVKFGGSGRAK
QTCIMRQCLQPMLPVTAACVTCGLDGWGQQPVIPIQKMNREIPSSLMECSVCYEIIHPDC
VAKLCPGMEGVVNEDLPNSWECPKCCKEGKNVEYRPRHFRARAKSSDIRRMSVSSDTNSA
LLDAIKVEGMKVEMDAVAALNTPGCDDFGRPLTPRDNPSSQQTTNSTGGDTIPAKRPKIE
PDEALNENQSSNWDERVLSSNEASVSPPGSIAIKRSQSSEDLASSVASPGNVNNNGTGGP
AEPRKLALRTQLAHQLSANSSKVLKRPSYVVRPAPGSNNRGIIGGNTTGCANLALEKACI
LPVFRYLSPADLARCALVCRAWARFSVEPSLWRRMELLHRHNLTAQHLAGISRRQPEQLA
LDWSGVAKRQLAWLVARLPQLRELSLQGCSWAGVSALRTCVCPPLASLDLSFVSGLNDAS
LRDILSPPPDSRPGLVDTKSRLRNLRTLRLAGCDITDVALRYVTQHLPRLGELDVSGCQR
VSDAGVAQLATAPAATINSLHSLNLSNCRLLTDSSLDHLARCDALIRVDLRHTPYVTAAA
IAKFAVRSRHGLKVMDGKLIAKRPAPA
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgacgggtaagaagtgcgatggtgggcgctccgaaacacagcgtgaatatatt
attcgtccgcgagatcgaaaagaacggaaacactacacagatgactgggctcttggagac
gaagaaatcgagggtcggcgctcattccgactagaggacaagatggaaagtgaccgtttt
ccacaatgttttgtaaaagaaatggtgggaccagatttcaacttggcatacttgcagaga
catgggtttaacaccccattgcttttccgtgataaaactggtcttggtttaagagttccc
agcccaaacttttctgtgaatgacgttcgtatgtgtgttggttcaagacgagttttagat
gtaatggatgtgaatacgcaaaaaaatgtagaaatgtctatgaaagaatggcagcggtac
tacgatgatccaaacaaagataaactgctcaacgttatctcgcttgaattttcacataca
aaacttgaaaattatgtccagactccatctttggtaaggcaaattgactgggttgatgtg
gtgtggccaagacacctcaaagaagcacagacagaatccacaaatgtgcttgacgaaatg
atgtaccccaaagttcagaaatattgtttaatgtctgtgaagggatgttacacagatttt
catgtggattttggagggacgtcagtctggtaccatatactgaaagggagcaagatattc
tggttaattcctccaacggaacgtaatatccagttgtatgaaaactgggttctttcaggg
aaacaatcagatgtgttctttggagacactgttgataagtgtggccgagtgactttaact
gctggtaatacattcttcatccctactggatggattcatgctgtatacacaccaatagac
tctcttgtgtttggaggaaatttccttcattcatttggaattgagaagcagttgaagaca
gcacaagtagaagacacaacacatgtaccgcagaagttccgttacccgttcttcactgag
atgctgtggtatgtactcgagcggtatgtgcactgcttattaggtcgctctcacctggat
gaaggtggtggtggtgcaggaagcccggattctgagactcccaagcgttctaattctcca
cagccaccagaaaaccacattcatctaacaccacaggagttgcatggccttaaagccatt
gtgatgttcctccattcactacctaccaacaagaagaatgttccagaattgattcgagat
cctattgctcttatcaaggatgtgcgaactcttgtggaacagcatcggtacgacaatcct
gaagcagctgttactgggaaaccaattctaagaggcccagaccagtctgataggcccaga
aatcgtggtggacgtcttcctctgacgaaaaactcgggtaatcgcagttccactcctttg
ccaccagggagcaagcagggaaaacatcggggatcaggagggaagggtggtcaaggtgcg
gggggtcctaggagaagacgaacacgatgcaagaagtgtgaagcctgtcaaaggagtgat
tgtggtgactgttcattctgcttggacatggtcaagtttggtggttctggtcgagctaaa
cagacttgcatcatgagacaatgcttacagccaatgttgccagttactgcagcatgcgtc
acttgtggacttgatggctggggacagcagcctgttatccctattcagaaaatgaacagg
gaaattccaagttcactgatggagtgtagtgtgtgttacgagatcatccaccctgactgt
gttgccaagctttgtcctggtatggaaggtgttgtaaatgaagatctaccaaatagttgg
gaatgtccaaagtgctgcaaagaaggaaaaaatgttgagtataggcctcgtcattttaga
gcaagggcgaaatcttctgatattcggagaatgtctgtaagcagtgatacaaattcagca
ttactagatgcaattaaagttgaaggaatgaaagtcgaaatggatgctgtagcagcttta
aatacaccaggatgtgatgattttggtcgtccactcacaccacgggacaatccaagctca
cagcagactacaaactctactggaggagatacgattcctgctaagaggccaaagattgag
ccagacgaagcacttaatgagaatcagtcatcaaattgggatgaacgagtattgtcttct
aacgaagccagtgtgtccccacctggtagtatagcaataaaacgtagtcagagttctgag
gacttggcttcaagcgttgcaagcccaggtaatgtgaataacaacggaactggtggtcct
gcagagccacggaaattggcattgcgtactcagttagcgcatcagctctctgctaactcc
agcaaagttctgaagagacctagttacgttgtacgtcctgcaccaggttcgaacaacaga
ggaatcatcggaggaaatactaccggctgtgcaaatcttgctttggagaaggcttgcatc
ttgcccgtgttccgatatctcagtcctgctgatctggctcgatgtgctttagtttgtagg
gcatgggcgagattttctgtcgaaccgagtttatggcgtcgaatggaactattgcacaga
cataacctaactgcacagcacttagctggaatatccagacgtcaaccagaacaattagca
ttagattggagtggtgtagcaaaacgacagttagcctggcttgtagccaggcttccacag
ctcagagaactatctctgcaggggtgtagttgggcaggagtcagtgcgctgcgtacttgt
gtctgcccgccgttagcttcattggacttaagttttgtaagcggactgaatgatgcttct
cttcgagatattttaagtccaccaccagattctaggccaggtctcgtagatacgaaatca
cggcttagaaacctacgcactttgcggttggcaggttgcgacattactgatgttgccctg
cggtacgtgactcagcacctccctcgattgggcgagttggatgtttccgggtgtcagcga
gtctcggatgctggagtggctcaacttgcaacagcacctgccgcaactataaactcgctt
catagtctcaatctttccaactgtcgacttctcacagattcaagcttagaccatcttgca
agatgcgacgctttgataagagtcgacttacggcacacgccgtatgtcacagcagctgcc
atcgcaaaattcgcagttaggagtcgacatggattgaaagtaatggatggaaaacttata
gcgaagaggccagcaccagcatga
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