Pseudomonas amygdali: BKM19_012660
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Entry
BKM19_012660 CDS
T05354
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
pamg
Pseudomonas amygdali
Pathway
pamg00020
Citrate cycle (TCA cycle)
pamg00785
Lipoic acid metabolism
pamg01100
Metabolic pathways
pamg01110
Biosynthesis of secondary metabolites
pamg01120
Microbial metabolism in diverse environments
pamg01200
Carbon metabolism
pamg01210
2-Oxocarboxylic acid metabolism
Module
pamg_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pamg_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
pamg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
BKM19_012660
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
BKM19_012660
Enzymes [BR:
pamg01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
BKM19_012660
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OxoGdeHyase_C
Transket_pyr
E1_dh
2-oxogl_dehyd_N
PFOR_II
Motif
Other DBs
NCBI-ProteinID:
AVB14347
UniProt:
A0AB35QZG4
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All DBs
Position
2512901..2515732
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AA seq
943 aa
AA seq
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MQESVMQRMWNSAHLSGGNAAYVEELYELYLHDPNAVPEEWRTYFQKLPADGSSATDVSH
STIRDHFVLLAKNQRRAQPVSAGSVSSEHEKKQVEVLRLIQAYRMRGHQAAQLDPLGLWQ
RPAPADLSINHYGLTNADLDTTFRAGDLFIGKEEASLREIHEALQQTYCRTIGSEFTHIV
DSEQRNWFMQRLESVRGRPAFSADIQSHLLERVTAAEGLEKYLGTKYPGTKRFGLEGGES
LIPMLDELIQRSGSYGTKEVVIGMAHRGRLNVLVNTFGKNPRELFDEFEGKKKVELGSGD
VKYHQGFSSNVMTAGGEVHLAMAFNPSHLEIVSPVVEGSVRARQDRRNDPNGDKVLPISL
HGDAAFAGQGVVMETFQMSQTRGFKTGGTIHIVINNQVGFTISNPLDSRSTEYATDVAKM
IQAPILHVNGDDPEAVMFVTQLAIDYRMQFKRDIVIDLVCYRRRGHNEADEPSGTQPLMY
QQITKQRTTRELYAEHLIKTGILDEARVQAKVDDYRSALDNGLHVVKSLVKEPNKELFVD
WRPYLGHAWTARHDTRFDLKTLQELSAKLMELPEGFVVQRQVQKIYEDRQKMQAGGLPIN
WGYAETMAYATLAFEGHPIRMTGQDIGRGTFSHRHAVLHNQKDAGTYIPLQNLYSGQPRF
DLYDSFLSEEAVLAFEYGYSTTQPDALVIWEAQFGDFANGAQVVVDQFITSGEHKWGRLC
GLTMLLPHGYEGQGPEHSSARLERYLQLCAEHNIQVCVPTTPAQIYHLLRRQVIRPLRKP
LIVLTPKSLLRHKLAVSTLEDLAEGSFQTVILEIDALDPAKVTRLVLCSGKVYYDLLEKR
RAEGREDIAIVRIEQLYPFPEDDLMETIAPYTNLQHVVWCQEEPMNQGAWYSSQHHLRRS
MGNHKRELVLEYAGRDASAAPACGYASMHAEQQEKLLQDAFTV
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaaagcgtgatgcagcgcatgtggaacagtgcccacctatccggtggtaacgct
gcctatgtggaagagctctatgagctttacctgcacgaccctaacgctgtgccagaagag
tggcgcacctactttcagaagttgccagcagacggcagctctgccactgatgtatcgcac
tcgactattcgcgatcatttcgtgttgctggccaaaaaccagcgccgcgctcaaccggtg
tccgccggcagtgtgagcagcgagcacgagaagaagcaggttgaagtgctgcgactgatc
caggcgtatcggatgcgtggccaccaggctgctcagctcgatccgttgggcctttggcag
cgccctgcgcctgcggatctgtcgatcaatcattacggcttgaccaatgccgatcttgat
acgaccttccgtgccggcgacctgttcatcggcaaagaggaagcgagcctacgcgaaatt
catgaagcgttgcagcagacatattgtcgcaccatcggctccgagttcacccatatcgtg
gattccgagcagcgcaactggttcatgcagcgtcttgagagtgttcgcggccgtccagcg
ttctcggctgatatccagagccacctgctcgagcgtgtcaccgcagccgaaggtctcgag
aagtatctgggtaccaaatatccgggtaccaagcgcttcggtctggaaggtggcgaaagc
ctgatcccgatgctcgacgagctgattcagcgttccgggtcctatggcaccaaggaagtc
gtgatcggtatggcccaccgcggccgcctcaacgtactggtcaacacctttggcaagaac
ccgcgcgaactgttcgacgagttcgaaggcaagaaaaaagtggaactgggttccggtgac
gtcaaatatcaccagggtttctcttccaacgtcatgaccgcaggcggtgaggttcacctt
gccatggcattcaacccgtctcacctggagatcgtttctccggtggtcgaggggtcggtg
cgtgcgcgtcaggatcgtcgcaacgatcctaacggtgacaaggttctgccgatttccctc
cacggcgacgcggcctttgccggtcagggcgtggtcatggaaaccttccagatgtcgcag
acccgcggcttcaagacgggcggcacgatccacatcgtcatcaacaaccaggtgggcttc
accatcagcaacccgctggactcgcgttcgaccgagtacgccaccgacgttgccaagatg
atccaggcgccgatcctccatgtaaatggtgatgatccggaagctgtgatgttcgtgacc
cagctggcgatcgattaccgcatgcagttcaagcgcgatatcgtgatcgatctggtctgc
taccgtcgtcgtggtcacaacgaagctgacgagccgagtggcactcagcctctgatgtat
cagcagatcaccaagcagcgcaccacccgtgagctgtatgccgagcatttgatcaagacc
ggcattctcgatgaagcccgtgttcaggccaaggtcgatgattaccgcagcgcgctggac
aatggtctgcacgtagtgaaaagcctggtcaaggagccgaacaaggagttgttcgtcgac
tggcgtccttatctgggccacgcctggactgcgcgtcacgacactcgcttcgacctcaag
accctgcaggaactgtccgccaagctgatggaacttcctgaaggcttcgtcgtgcagcgt
caggttcagaagatctacgaagaccgtcagaagatgcaggccggtggcttgccgatcaac
tggggttacgccgaaaccatggcatacgccacgctggcgttcgaaggtcacccgatccgt
atgacagggcaggacatcggtcgcggtacgttctcgcaccgccacgccgtactgcacaac
cagaaagacgccgggacctatatcccgctgcagaatctgtactccggtcagccgcgtttc
gacctgtacgactcgttcctttcggaagaggccgtgctggcattcgaatacggttactcg
accacccagccggatgcactggttatctgggaagcgcagttcggcgacttcgccaacggt
gcccaggtggttgtcgaccagttcatcaccagcggtgaacacaagtggggccgtctgtgc
ggtctgaccatgctgttgcctcacggctacgaaggtcaggggccagagcactcgtcggca
cgtcttgagcgttacctgcaattgtgtgccgagcacaacattcaggtgtgcgtgccaacg
actccggcgcagatctaccatttgctgcgtcgtcaggtcatccgtccgctgcgcaagccg
ctgatcgtgctgactcccaagtcgttgctgcgtcacaaactggctgtttcgaccctggaa
gatctggccgaaggctcgttccagaccgtcattctggaaatcgatgccctcgatccggcc
aaggtcacgcgtctggtgctgtgcagcggcaaggtttactacgacctgctggaaaaacgc
cgtgccgaagggcgtgaagacattgccatcgttcgtatcgagcagctgtacccgttccct
gaagacgacctgatggaaaccatcgcgccgtacaccaacctgcagcatgtggtctggtgt
caggaagaaccgatgaaccagggtgcctggtacagcagtcagcaccacctgcgccgcagc
atgggcaaccacaaacgtgaactcgttcttgagtacgccggtcgtgacgcctctgccgct
ccagcttgtggttacgcttcgatgcacgccgagcagcaggaaaaactgttgcaagatgcc
ttcactgtttaa
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