Pseudomonas amygdali: BKM19_024145
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Entry
BKM19_024145 CDS
T05354
Name
(GenBank) UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
pamg
Pseudomonas amygdali
Pathway
pamg00540
Lipopolysaccharide biosynthesis
pamg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pamg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
BKM19_024145
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pamg01005
]
BKM19_024145
Enzymes [BR:
pamg01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
BKM19_024145
Lipopolysaccharide biosynthesis proteins [BR:
pamg01005
]
Lipid A
BKM19_024145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-ProteinID:
AVB16299
LinkDB
All DBs
Position
complement(4955396..4956307)
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AA seq
303 aa
AA seq
DB search
MIKQRTLKNIIRATGVGLHSGEKVYLTLKPAPVNTGIVFCRADLDPVVQIPARAENVGDT
TLSTTLVNGDVKVDTVEHLLSAMAGLGIDNAYVELSASEVPIMDGSAGPFVFLIQSAGLE
EQDAPKKFIRILREVTVEEGGKRATFVPFEGFKVSFEIDFDHPVFRDRTQSASVDFSSTS
FVKEVSRARTFGFMSDIEYLRKHNLALGGSVENAIVVDKDGVLNEDGLRYEDEFVKHKIL
DAIGDLYLLGNSLIGEFRGFKSGHALNNRLLRTLIEQKDAWEVVTFEDASTAPISYMRPV
AAV
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgattaaacaacgcaccctgaaaaatattatccgcgccacaggtgtaggcctgcactcc
ggggagaaggtttacctgaccctcaagcccgcacctgtgaataccggcattgtgttttgc
cgagctgaccttgaccccgtcgtgcagatccctgcgcgtgcggaaaacgtcggcgacacc
actctgtcgaccactctggtcaatggtgatgtcaaagttgacacggtagaacacctgctc
tcggccatggctggccttggcatcgataacgcctacgtcgagctctctgcctccgaagtt
cctatcatggacggcagcgcaggccctttcgtattcctgattcaatcggctggcctggaa
gaacaggacgcgccgaagaaattcatccgcatcctgcgtgaagtcacagtggaggagggc
ggtaaacgcgctactttcgtgcctttcgaagggtttaaggtcagtttcgagattgatttc
gatcaccccgtcttccgtgatcgcacccagagtgcaagcgtggacttttccagcacttcc
ttcgtgaaggaagtcagccgtgcccggaccttcgggttcatgagtgacatcgagtacctg
cgcaagcacaacctcgcactcggcggcagtgtggaaaacgccatcgtggtcgacaaggac
ggcgtactgaacgaagacggcctgcgttacgaggacgaattcgtcaaacacaaaatcctc
gacgccatcggtgacctttacctgctgggcaatagcctgatcggtgagttccgtggcttc
aaatcggggcatgcactgaacaatcgtctcctgcgcacgttgatcgagcagaaagacgct
tgggaagtggtgactttcgaggatgccagtacggcacctatttcctacatgcgccctgtc
gcggccgtgtag
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