Paracoccus aminophilus: JCM7686_2548
Help
Entry
JCM7686_2548 CDS
T02792
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
pami
Paracoccus aminophilus
Pathway
pami00300
Lysine biosynthesis
pami00550
Peptidoglycan biosynthesis
pami01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pami00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
JCM7686_2548
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
JCM7686_2548
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pami01011
]
JCM7686_2548
Enzymes [BR:
pami01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
JCM7686_2548
Peptidoglycan biosynthesis and degradation proteins [BR:
pami01011
]
Precursor biosynthesis
Amino acid ligase
JCM7686_2548
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
LpxD
Motif
Other DBs
NCBI-ProteinID:
AGT09616
UniProt:
S5YWP3
LinkDB
All DBs
Position
complement(2647983..2649467)
Genome browser
AA seq
494 aa
AA seq
DB search
MSETAKRLSLLGLRGDKGRDPEVTGLAVDSRQVKPGYLFAALPGSSAHGASFIQYALRLG
AAAVLTDREGAALAAAELSGAEAALVVVEDPRAALAAAAALWFGAQPETLVAVTGTSGKT
SVATFTRQIWQLLGEQAISLGTMGVQGDYEAKLAHTTPEPITLHRVLAEAAAAGVTHACM
EASSHGLDQRRLDGVRVLAGAFTNFTQDHLDYHKNFDEYFAAKALLFNHILEEGASAVIN
IDDPRGLQLLAIAQARGLKIIRVGRSPEADLRILGQRYDATGQDLRFSIFGKTHMVRLAL
IGGFQAENVLAAAGLVIATGTDPDAVVAVLPRLTTVRGRMELAAMRENGAAVFVDYSHKP
GALASALQSLRPHVMGRIVVIFGAGGDRDRLKRPLMGEAARDFADVVFVTDDNPRSEDPA
AIRAEVMAGAGPDAIEVGDRAEAILRGVDALQPGDALLIAGKGHETGQIIGNDIFPFDDS
EQASVAVAALDGKI
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
gtgtctgagactgcgaaacgtttgtcccttctggggctgagaggggacaaggggcgtgat
cccgaggtaacggggctcgcggtcgattcgcgacaggtcaagccgggctatctcttcgcc
gcgctgccggggtcgagcgcgcatggcgcaagcttcatccaatatgccctgcgtctgggc
gcggctgcggtgctgaccgaccgcgagggcgccgctttggctgcggccgagctttcgggc
gccgaggccgctctcgtggtggttgaggatccgcgcgcggcgctggccgccgctgccgct
ttgtggttcggcgcgcagcccgagacgctggtcgcagtgaccgggacctcaggcaagacc
tcggtcgcgaccttcacgcggcagatctggcagcttctgggcgaacaggcgatcagcttg
ggcaccatgggcgtgcagggcgattacgaggcgaagctcgcccataccacgcccgagccg
atcacgctgcatcgcgtgttggccgaggccgccgctgcgggcgtcacccatgcctgtatg
gaagcctcgtcgcatgggctggaccaacggcgtttggacggcgtgcgggtgctggcgggg
gctttcacgaatttcacccaagaccatctcgactatcacaagaacttcgacgagtatttc
gccgccaaagccttgctcttcaatcatattctggaagagggcgcgagcgcggtcatcaat
atcgacgatccgcgcggtcttcagttgcttgcgatcgcacaggcgcgcgggctgaaaatc
atccgcgtcgggcgcagccccgaggccgatctgcgcatcctcggccagcgctatgatgcg
accgggcaggatctgcgcttctcgatcttcggcaagacccatatggtccggcttgcgctg
atcggcggctttcaagcggaaaacgtgctggcggcggcggggctcgtcatcgcgaccggc
accgatcccgacgcggtggtcgcggtcttgccgcgcctgaccacggtgcgcggccgcatg
gagctggcggcgatgcgcgaaaacggcgcggcggtctttgtcgattactcgcataaaccc
ggcgcgctggcctcggcgctgcaatccctgcgcccgcatgtcatgggccgcatcgtcgtg
atcttcggcgcaggcggcgatcgcgaccggctcaagcgcccgctgatgggcgaggccgcg
cgcgactttgctgatgtggtcttcgtgaccgacgacaacccccgctccgaggatccggcg
gcgatccgggccgaggtcatggcgggcgccggacccgatgcgatcgaggtcggcgaccgc
gccgaggcgatcttgcgcggcgtcgatgcgctccagcccggcgatgctttgctgatcgcg
ggcaagggccatgaaaccggccagatcatcggcaacgacattttccccttcgacgattcc
gagcaggcctcggtcgccgtcgcagcactggacggcaagatatga
DBGET
integrated database retrieval system
