Pantoea sp. MT58: IAI47_15900
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Entry
IAI47_15900 CDS
T10894
Symbol
lpxC
Name
(GenBank) UDP-3-O-acyl-N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
pamt Pantoea sp. MT58
Pathway
pamt00540
Lipopolysaccharide biosynthesis
pamt01100
Metabolic pathways
Module
pamt_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
pamt00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
IAI47_15900 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pamt01005
]
IAI47_15900 (lpxC)
Enzymes [BR:
pamt01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
IAI47_15900 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
pamt01005
]
Lipid A
IAI47_15900 (lpxC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-ProteinID:
QNQ58169
LinkDB
All DBs
Position
complement(3356000..3356917)
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AA seq
305 aa
AA seq
DB search
MIKQRTLKRIVQATGVGLHTGKKVTLTLRPASANTGVIYRRTDLNPPVDFPADAKYVRDT
MLSTCLVNDEGVRISTVEHLNAALAGLGIDNIIVEVDAPEIPIMDGSAAPFIYLLMDAGI
EQLNSAKKFVRVKQTVRVEEGDKWAEIKPYNGFSLDFTIDFKHPAIDSSSQRYAMNFSAD
AFVRQISRARTFGFMREIEYLQSKGLCLGGSLDCAIGLDDFRVLNEEGLRFEDEFVRHKM
LDAIGDLFMCGHNIIGAFSAFKSGHALNNKLLQAVLAKQEAWEWATFEDEAELPVAFKAP
NLVLA
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaacaaaggacattaaaacgtattgttcaggcgacgggtgtcggtttacatacc
ggcaaaaaagtcacactgacattacgccctgcgtcggctaataccggggtcatctatcgt
cgcaccgacttgaatccaccggtagattttccggctgatgcaaaatacgtgcgcgacacc
atgctgagtacctgcctggtgaatgatgaaggcgtgcgtatttcaacggttgaacacctc
aatgccgccttggcgggtctgggtatcgacaacattattgttgaagtcgatgcgccggaa
atcccgatcatggatggcagcgcagcaccgtttatctatctgctgatggatgcgggtatc
gagcagctcaacagcgcgaagaaatttgtgcgtgttaagcagaccgtgcgtgtggaagag
ggtgacaaatgggccgagatcaaaccgtacaacggtttctcgcttgatttcaccatcgac
ttcaaacacccggctatcgactccagctcacagcgctatgcgatgaacttctctgctgac
gcctttgttcgtcaaatcagccgggcgcgtacatttggctttatgcgtgaaatcgaatat
ctgcagtctaaaggcctgtgcctgggcggtagcttagattgtgcgataggtctggatgat
ttccgcgtactgaatgaagaaggtctgcgttttgaggacgagtttgttcgtcacaaaatg
ctggacgcgattggcgacttgtttatgtgtggtcacaacatcattggcgcattctctgcg
tttaaatcgggtcacgcgctgaataacaagttgctgcaagcggttctggctaagcaggaa
gcctgggaatgggcaaccttcgaagacgaagctgaactgccagtggcattcaaagcaccg
aatctggttctggcttaa
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