Paenibacillus amylolyticus: P9222_18085
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Entry
P9222_18085 CDS
T09036
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
pamy
Paenibacillus amylolyticus
Pathway
pamy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pamy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
P9222_18085 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pamy03400
]
P9222_18085 (nth)
Enzymes [BR:
pamy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
P9222_18085 (nth)
DNA repair and recombination proteins [BR:
pamy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
P9222_18085 (nth)
Prokaryotic type
P9222_18085 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_8
RLAN
HHH_5
Motif
Other DBs
NCBI-ProteinID:
WFR60506
LinkDB
All DBs
Position
3675016..3675711
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AA seq
231 aa
AA seq
DB search
MNAATVRHILETMEAMFPDAHCELNHSNAFELTVAVLLSAQCTDETVNKVTADLFQKYKS
PADYLAVPLEELEQDIRRIGLYRNKAKHIQNMCRILIEQYGGDVPQEHDQLVTLPGVGRK
TANVVVSNAFGVPAIAVDTHVERVSKRLALAGWDDSVLEVEKKLMKRVPRDEWTLTHHRF
IFFGRYHCKAQNPACHICPLLDICREGKKRMKTSQIRKDKECVITRKRKIN
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcagcgacggttaggcatatactcgaaacgatggaagcaatgtttcctgatgca
cattgcgaattaaatcacagcaatgcatttgaattgacggtagctgtccttttgtctgcc
cagtgcaccgatgaaacggtgaacaaggtgaccgcagatctgttccagaagtacaaaagc
ccggcagattatctggcagttccgctggaagagttggaacaggatattcggcgaatcggt
ttgtaccggaacaaggccaagcatattcagaacatgtgccgaattttaatagagcagtat
ggcggtgatgtaccgcaggaacatgatcagcttgtgacgctaccaggtgtcgggcggaaa
accgcgaatgtagttgtgtccaatgcgtttggagtaccggcaattgcggtagatactcat
gtagaacgtgtatccaagcggctggcacttgcaggttgggatgactccgtacttgaagtc
gaaaagaaactaatgaagcgcgtaccccgggatgaatggactttaactcaccaccggttt
atattttttggacgctaccattgcaaggcacagaaccctgcatgtcatatctgtccattg
ctggacatatgcagggaagggaaaaaacgtatgaaaacgtcccaaatcaggaaagataag
gaatgtgtcatcacccgaaaacgaaaaataaattaa
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