Podospora anserina: PODANSg8941
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Entry
PODANSg8941 CDS
T01048
Name
(RefSeq) hypothetical protein
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
pan
Podospora anserina
Pathway
pan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PODANSg8941
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pan03019
]
PODANSg8941
Messenger RNA biogenesis [BR:
pan03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
PODANSg8941
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_29
AAA_16
AAA_28
AAA
Arf
AAA_22
DUF3584
AAA_23
AAA_15
AAA_25
PduV-EutP
ORC-CDC6-like
SRP54
AAA_14
RsgA_GTPase
AAA_13
NACHT
AAA_33
Motif
Other DBs
NCBI-GeneID:
6196380
NCBI-ProteinID:
XP_001911896
UniProt:
B2B7E6
LinkDB
All DBs
Position
2
AA seq
290 aa
AA seq
DB search
MAPPSGPPSVVTNNLSYLFQDHSTGLSGITLSLPPRSRTLLIGANGAGKTTLLRLLAGKR
LAPAGTITIGGNDPFKVGLEGVTYLGLEWVLNAIVRTDIGVDELLRSVGGDQYPDRRDEL
VAVLDIDTRWRMHAVSDGERRRVQLAMGLVRPWTILLLDEITVDLDVWSRSQFLSFLKKE
TEERECTVVYATHILDNLAGWPTHLVHMHLGTVVEWGTTEEMLESKLGGEKETGNSRLGE
LVLRWLKEDLDRRGPRDQLRRGPEGLSYNSGNLGIGGYGLESKSKLEEKR
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atggcccccccttccggccccccctcggtagtaacaaacaacctctcctacctcttccaa
gaccactccaccggcctctcaggcataaccctctccctcccccccagatcccgcaccctc
ttgatcggcgccaacggcgcaggcaaaaccaccctcctccgcctcttggcgggaaaacgc
ctagcgccagcaggcacaatcaccatcggcggcaacgaccccttcaaagtcggcctcgag
ggcgtgacctacctcggcctggaatgggtcctcaacgccatcgtccgcaccgacatcggc
gtcgacgagctcctccgctccgtcggcggggaccaataccccgaccgtcgtgacgagctc
gtcgccgttctcgacatcgataccaggtggaggatgcacgccgtttccgacggcgagcgc
cgcagggtccagctcgccatgggcctagtccggccgtggacgatcctgttattggatgaa
atcaccgtcgacctggacgtctggtcccggagtcagtttttgagctttttgaaaaaggag
acggaggagagggagtgcacggttgtgtatgcgacgcacatattggataatttggcgggg
tggccgacgcatttggtgcatatgcatcttgggacggtggtggagtgggggacgacggag
gagatgttggagagtaaactggggggagaaaaagagacgggaaacagtcggctaggggag
ttggtgttaaggtggttgaaggaggacttggatagaagggggccgagagaccagttgagg
agggggccggaggggttgagttataattcggggaatttggggattggggggtatgggtta
gagagtaagagcaagttggaggagaagagatga
DBGET
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