Pandoraea sp. XY-2: DRB87_08170
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Entry
DRB87_08170 CDS
T06086
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
pand
Pandoraea sp. XY-2
Pathway
pand03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pand00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DRB87_08170 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pand03400
]
DRB87_08170 (nth)
Enzymes [BR:
pand01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
DRB87_08170 (nth)
DNA repair and recombination proteins [BR:
pand03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DRB87_08170 (nth)
Prokaryotic type
DRB87_08170 (nth)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
Ogg-HhH
EndIII_4Fe-2S
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QBC31337
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All DBs
Position
complement(1786112..1786756)
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AA seq
214 aa
AA seq
DB search
MNDAKRRALFETLQQLNPHPTTELEYTSPFELLIAVLLSAQATDVSVNKATRKLYAVANT
PAKMLALGEAGVADYIKTIGLYRTKAKNVIATCQLLLDAHGGEVPRSREALETLPGVGRK
TANVVLNTAFGEDTIAVDTHIFRVANRTGLAPGKDPLAVELALERVIPREFKHDAHHWLI
LHGRYVCKARKPECWHCAIEPLCDFRPKTPAPKG
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacgccaaacgacgcgccctgttcgaaacgttgcagcaactgaatccgcatccg
acgacggagctggagtacacgtcgccattcgagttgttgatcgccgtgctgctttcggcc
caggcgaccgacgtctccgtaaacaaggccacacgcaagctctacgcggtggccaacacc
ccggcaaagatgcttgcgctgggcgaggccggggttgccgattacatcaagacgatcggg
ctgtaccgcaccaaggccaagaacgtcatcgccacctgccagttgctgctcgacgcgcac
ggcggcgaagtgccccgctcgcgcgaagcgctcgaaacgctgccgggcgtcggtcgcaag
acggccaatgtcgtgctcaataccgcgttcggcgaagacaccattgctgtcgatacgcac
atcttccgcgtggcgaaccgcacgggtctcgcgcctggcaaggatccgctggccgtggaa
ctggcgctggagcgcgtcatcccgcgcgagttcaagcacgatgcgcaccactggctcatt
ttgcacggccgctatgtgtgcaaggcgcgcaagccggagtgctggcactgcgccatcgag
ccgttgtgcgacttccgccccaagacacccgcgccgaagggctga
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