Pandoraea sp. XY-2: DRB87_08650
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Entry
DRB87_08650 CDS
T06086
Name
(GenBank) malate dehydrogenase
KO
K00024
malate dehydrogenase [EC:
1.1.1.37
]
Organism
pand
Pandoraea sp. XY-2
Pathway
pand00020
Citrate cycle (TCA cycle)
pand00270
Cysteine and methionine metabolism
pand00620
Pyruvate metabolism
pand00630
Glyoxylate and dicarboxylate metabolism
pand00680
Methane metabolism
pand00710
Carbon fixation by Calvin cycle
pand00720
Other carbon fixation pathways
pand01100
Metabolic pathways
pand01110
Biosynthesis of secondary metabolites
pand01120
Microbial metabolism in diverse environments
pand01200
Carbon metabolism
Module
pand_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pand_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pand_M00012
Glyoxylate cycle
pand_M00168
CAM (Crassulacean acid metabolism), dark
pand_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
pand00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
DRB87_08650
00620 Pyruvate metabolism
DRB87_08650
00630 Glyoxylate and dicarboxylate metabolism
DRB87_08650
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
DRB87_08650
00720 Other carbon fixation pathways
DRB87_08650
00680 Methane metabolism
DRB87_08650
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
DRB87_08650
Enzymes [BR:
pand01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 malate dehydrogenase
DRB87_08650
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Gene cluster
GFIT
Motif
Pfam:
Ldh_1_N
Ldh_1_C
Rv2466c-like
Motif
Other DBs
NCBI-ProteinID:
QBC31415
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All DBs
Position
complement(1885329..1886312)
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AA seq
327 aa
AA seq
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MAKPAMRVAVTGAAGQIGYSLLFRIANGDMLGKDQPVILQLLDLPQAQAAVKGVVMELED
CAFPLLAGVVVTDDPKVAFKDADVALLVGARPRSKGMERKDLLEANGAIFTVQGKALDEV
AKRDVKVLVVGNPANTNAYIAMKSAPNLPKENFTAMLRLDHNRALSQLAAKTGKPVASIE
KLAVWGNHSPTMYADYRFATIDGQSVKSMINDDVWNNDVFLPTVGKRGAAIIEARGLSSA
ASAANAAIDHIHDWVLGSNGKWVTMGIPSDGSYGIPQDVIYGVPVICENGKYKRVEGLEI
DAYSREKMNFTLNELEEERAGVAHLLG
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacccgcaatgcgtgtcgccgtcaccggcgccgctggccaaatcggctattcc
ctgctgttccgcatcgccaatggcgacatgctcggcaaggatcagcccgtcatcctgcaa
ctgctcgacctcccgcaagctcaagccgccgtcaagggcgttgtgatggagctggaagac
tgcgcattcccgctgctcgccggcgtggttgtgaccgacgaccccaaggtcgccttcaag
gatgccgacgtcgccctgctggtgggtgcccgtccgcgctcgaagggcatggagcgcaag
gatctgctcgaagccaacggcgcaatcttcacggtgcagggcaaggccctggatgaagtc
gccaagcgtgacgtcaaggtgctggtcgtcggcaacccggccaacaccaacgcctatatc
gccatgaagtcggcaccgaacctgccgaaggaaaacttcaccgcgatgctgcgcctggac
cacaatcgcgccctgtcgcaactcgccgccaagaccggcaagccggtcgcgagcatcgag
aagctggccgtgtggggcaaccactcgccgacgatgtacgccgactaccgcttcgccacg
atcgacggccagagcgtcaagtcgatgatcaacgacgacgtgtggaacaacgacgtgttc
ctgcccacggttggcaagcgcggcgccgccatcatcgaagcccgcggcctgtcgtcggcc
gcttcggcggccaacgcggccatcgaccacatccatgactgggtgctgggctcgaacggc
aagtgggtcacgatgggtatcccgtcggacggctcgtacggcattccgcaagacgtgatc
tacggcgtgccggtgatctgcgaaaacggcaagtacaagcgcgtggaaggcctcgagatc
gacgcttactcgcgagaaaagatgaacttcacgctcaacgaactcgaagaagagcgcgct
ggcgtggcacatctgctgggctaa
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