Polynucleobacter antarcticus: DCO16_00845
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Entry
DCO16_00845 CDS
T08332
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
pani
Polynucleobacter antarcticus
Pathway
pani00300
Lysine biosynthesis
pani00550
Peptidoglycan biosynthesis
pani01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pani00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
DCO16_00845
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
DCO16_00845
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pani01011
]
DCO16_00845
Enzymes [BR:
pani01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
DCO16_00845
Peptidoglycan biosynthesis and degradation proteins [BR:
pani01011
]
Precursor biosynthesis
Amino acid ligase
DCO16_00845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
YqeC
LpxK
Motif
Other DBs
NCBI-ProteinID:
QKM61754
UniProt:
A0A6M9PHY5
LinkDB
All DBs
Position
145579..147132
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AA seq
517 aa
AA seq
DB search
MMAIVKMESHLLISQLHALTSANARIYSDSRQINVGDIFFAYPVGHGVALRDGREYISAA
LAKGAAAIVFDPIDDLAHEYSEHPLCFAIENLALLAGPLCAEWYGYPGNKLNIIGVTGTN
GKTSITQWLSQALDEPNHRVAVMGTLGTGFPGHLKQTGYTTPDAPRLQTQLKELQDSGAQ
QVVMEISSHALDQRRIAGLDIHCAVFTNLSQDHLDYHGTMAHYGEAKASLYQQPGLEHAV
INFDDPFGRELATKLLARNSLEVWGYALKEETFAEYEKFGKRLKRTYIKESSLISNGYDV
IFHYEELSSNRMHLPVLGDFNLSNCLAVWTILLTQGISTIDASQRMTKLRPVSGRMELIA
LNQTQRTAGPLVVVDYAHTPDALSKALLALRPMADQRGGKIWCVFGCGGDRDIGKRSQMG
RVAQECADQIIITSDNPRSEDPESIIAMIQSGMLEGQQQVQTIFDRAAAIMAAVRHADIK
DIILVAGKGHESTQEIKGKKFDFSDQAHILLAAGGSV
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgatggcaatcgtgaaaatggaatcccatctcctcatctctcaattgcatgctctgacg
tctgcaaatgcaagaatatactctgatagtcgccagattaatgtaggagatattttcttt
gcctatccggttggccatggtgtggcattacgggatggtcgtgagtatatttctgctgct
ttagctaagggtgcagccgctatcgtatttgaccccattgacgatcttgcacatgaatat
tcagagcatccactatgttttgcgattgaaaatcttgctttgttagcgggaccgctttgt
gctgagtggtatgggtatcccggaaataagctcaacatcatcggtgtcacaggcaccaat
ggaaaaacaagtattactcagtggctttcacaagcacttgatgagcccaatcatcgggta
gcagtaatgggaacattgggtacaggcttccccgggcatctcaagcaaacaggttatacg
acaccagatgcaccgcgcctacaaacccaattaaaagaattgcaggactctggtgctcag
caagttgtgatggagatttcttcgcatgccctggatcaaagacgtattgctggattagac
attcattgcgcggtattcactaatttgagccaagatcatttagattatcacggcaccatg
gctcactatggcgaggccaaagcaagcctttatcagcagccaggtcttgagcatgccgta
attaattttgatgatccatttgggcgtgagcttgccacgaagttgcttgctaggaatagc
cttgaggtatggggatatgcgctaaaagaagaaacctttgctgaatatgagaagtttgga
aaacgcttaaagcgaacttacattaaagaaagcagtctgatatcaaatggctatgacgtc
atctttcattatgaagagctgagttccaataggatgcatctcccagtgctaggagatttt
aatttaagtaactgcttagcggtatggaccatattactgacgcaaggtatcagtacgatc
gatgcgagccagcgaatgacaaagttacgtcctgtgtcaggtcgcatggaactcattgcg
ctcaatcaaacccaaagaaccgcaggacccttagtggtagtggactacgcacacacacct
gatgcactcagtaaggcactgcttgctttacgcccaatggccgatcaacgcggtggaaag
atttggtgtgtttttggttgtggtggcgatcgagatattggtaagcgttcacaaatggga
cgcgtagcacaagaatgtgctgatcaaatcattatcactagcgataatccaagatctgaa
gaccctgagtctattattgccatgattcaatctggaatgctagagggccagcagcaggtt
cagacgatttttgatcgagcggcagccattatggctgcagtgcgccatgctgatattaaa
gacatcatcttagttgctggtaaaggacacgagtctactcaagaaatcaaaggtaagaaa
tttgacttctcagatcaagcacatattcttttagctgcaggagggagtgtatga
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