Polynucleobacter antarcticus: DCO16_06465
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Entry
DCO16_06465 CDS
T08332
Symbol
sucA
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
pani
Polynucleobacter antarcticus
Pathway
pani00020
Citrate cycle (TCA cycle)
pani00785
Lipoic acid metabolism
pani01100
Metabolic pathways
pani01110
Biosynthesis of secondary metabolites
pani01120
Microbial metabolism in diverse environments
pani01200
Carbon metabolism
pani01210
2-Oxocarboxylic acid metabolism
Module
pani_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pani_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
pani00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
DCO16_06465 (sucA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
DCO16_06465 (sucA)
Enzymes [BR:
pani01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
DCO16_06465 (sucA)
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Gene cluster
GFIT
Motif
Pfam:
OxoGdeHyase_C
Transket_pyr
E1_dh
2-oxogl_dehyd_N
PFOR_II
Motif
Other DBs
NCBI-ProteinID:
QKM62729
UniProt:
A0A6M9PQ55
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All DBs
Position
complement(1229824..1232682)
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AA seq
952 aa
AA seq
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MMQDQRDTSYLFGGNAPYVEELYESYLHDPASVSDHWRDYFDNVKQVPAADGSSRSDVAH
GPIVASFAERAKQGPIRTVSADSADSDMGFKRVAVQQLIAAYRNVGNRWADIDPLKRTER
PDIPELDPAFYGFTDGDMDIVFNTSNTFFGKNQMTLRDLLQALRETYCGTLGAEYMYIAD
QKIKKWWQEKLESVRSTPHFSADQKREILDRVTAAEGLERYLQAKYVGQKRFSLEGGESF
IACMDELIRESSAKGVQEIVLGMAHRGRLNVLINTLGKMPTDLFAEFEHKGPETLPAGDV
KYHQGFSSDISTPSGPVHLSLAFNPSHLEIVNPVVEGSARARMERRGDLLGEKVLPVLVH
GDAAIAGQGVMQETLMMAEVRGYSTGGTIHIVINNQIGFTTSDPRDLRSSLYCTDIMKVI
DAPVLHVNGDDPEAVVLATKLAVEFRSQFHKDVAIDIVCFRKLGHNEQDTPAMTQPLMYK
IIAAHPGTRKLYADKLEAQGVLPVGTGDLMVKEYRAAMDAGKQTSDPVLSNFKGKFAVDW
SPFLNKKWTDEADTAIPLTEWRRLAERVTSVREGFKVHPLVEKVLNDRSAMGRGEINVDW
GMGEHMAFASLVASGYPVRLSGEDSGRGTFTHRHAVFHNQNREKWDAGIYIPLRHIAKDQ
APFVVIDSILSEEAVLGFEYGYAAAEPNTLTIWEAQFGDFANGAQVVIDQFIASGEVKWG
RANGLVMMLPHGYEGQGPEHSSARLERFMQLCADTNMQVIQPTTASQIFHVLRRQMIRQF
RKPLILMTPKSLLRNKEAASPLSEFTKGGFHTILGERDETIDAKKVTRLIICSGKVYYDL
VKARTEKKQDEVAIIRLEQLYPFPHKALAAELKKFSNVAEVIWCQDEPQNQGAWFFVQHN
ILENMSEGMKLAYAGRPASASPACGYAHLHQEQQKSLLTSAFAKLKGYVITK
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaggatcagagagatacctcttatctcttcggcggtaacgccccttacgtagaa
gagctctacgaatcttatttgcacgatccagcttcagtatcggatcattggcgagactat
tttgataacgtaaagcaggttcctgcagccgatgggtcatctcgatctgatgtagctcat
gggccgattgtggcttcctttgctgagcgtgcaaaacaaggccctatcagaactgtttct
gcggattcagcagattcagatatgggcttcaagcgtgttgctgttcaacagttgattgcg
gcgtatcgtaacgttggcaatcgttgggctgatattgaccccttgaaacgcactgaacgc
cctgatattccagagctggaccctgctttttatggttttacagatggcgatatggatatc
gtcttcaatacgagcaatactttcttcggtaagaatcagatgaccttgcgggatttactg
caagctttgcgtgaaacgtattgcggtactttaggtgctgagtatatgtatattgccgac
caaaagattaaaaaatggtggcaagaaaaattagaatctgttcgatccactcctcatttt
agcgctgatcagaagcgcgaaattttagaccgcgtcaccgcggctgaaggtttagagcgt
tatcttcaagcgaaatatgtcggtcaaaaacgattttctttggagggtggtgaaagtttc
attgcctgtatggatgaattaattcgtgagtcttccgccaaaggagtgcaagagattgtg
ctaggaatggcccatcgcggtcgcctcaatgtccttattaatactttagggaaaatgcca
acggacttgtttgctgagtttgagcataagggccctgaaacattgccagccggtgacgtg
aagtatcaccaaggcttttcaagtgatatttccacaccatcaggtcccgtacatttatca
ctagcatttaatccctcacatttagagattgttaacccagtagtggagggttctgcacgt
gctcgtatggagcgtcgtggtgatttactcggagaaaaggtgttgccagtattggtacat
ggtgatgcggcgatagcaggtcaaggcgtcatgcaagagaccttgatgatggctgaggtg
cgtgggtattctactggcggcactattcatatagtcattaacaatcaaattggtttcaca
acatcggatccacgtgatttacgttcaagcttgtattgcacggacattatgaaagtcatt
gatgcgcctgtactgcatgtgaatggcgatgatcctgaggcggtagtgctagctacaaaa
ttagcagtcgagttccgttcgcagtttcataaagatgttgcgattgatattgtttgtttc
agaaagctaggtcacaacgagcaagatacgccagcgatgacccagccattgatgtacaaa
attattgcagcccatccaggaacgcgtaagctctatgcggataagttagaggcccaaggt
gttctaccagtgggtactggcgatttgatggtgaaggaatatcgcgctgcaatggatgct
ggtaagcaaacttcagatcccgtgttgagtaactttaaaggtaagtttgcagtagattgg
tcgccatttctgaataagaaatggactgatgaagccgatactgccattcccttaacggag
tggagacgtttagcagagcgagtcacttccgtgcgggaaggttttaaagttcacccgttg
gttgaaaaagtattaaatgatcgttctgccatgggtcgtggtgagattaatgtcgactgg
ggtatgggcgagcatatggcgtttgcttctttagtggcgagcggttatccggttcgctta
tctggtgaagatagtggtcgcggtacctttacgcatcgacatgctgttttccataatcag
aatcgcgagaagtgggatgctggcatttatattccactacgccatattgcaaaagatcaa
gcgccatttgtagtgattgattccattctttctgaggaggctgtacttggttttgagtat
ggctacgctgctgcagaaccaaatacgctcaccatctgggaagctcagtttggcgacttt
gctaacggtgctcaagtcgtgattgaccaatttatcgcttctggtgaagtcaaatggggt
cgcgccaatggcttggtcatgatgttgccccatggctacgagggtcaaggccctgaacac
tcatctgctcgattggagcgatttatgcaactatgcgcagataccaatatgcaggtgatt
cagccgactactgcatcgcaaatcttccatgtactgcgacgtcagatgattcgtcagttc
cgcaagcctctgattttgatgactccaaaatctttactgcgcaataaagaagctgcctct
ccactaagtgagttcaccaaagggggctttcatactatccttggcgaacgagatgagact
attgatgccaagaaggtaactcgtttaattatctgttccggtaaggtctactacgactta
gtgaaagcgcgtactgagaaaaaacaagatgaagttgccattattcgcttggagcaactc
tatccatttccacataaagcattggctgctgagttgaagaagttctctaatgtagcggaa
gttatatggtgtcaagatgagccgcagaatcaaggcgcttggttctttgttcagcacaat
attttagaaaatatgtctgaaggtatgaagctggcatatgcaggtcgaccagcatctgct
tcacctgcttgtggttatgcccaccttcatcaagaacaacagaagtcactcctcacatca
gcttttgcaaaacttaagggctatgtcattacgaagtaa
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