Pandoraea sp. NE5: PanNE5_25580
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Entry
PanNE5_25580 CDS
T10412
Name
(GenBank) AmrB family multidrug efflux RND transporter permease subunit
KO
K18095
multidrug efflux pump
Organism
pann Pandoraea sp. NE5
Pathway
pann01501
beta-Lactam resistance
pann02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pann00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PanNE5_25580
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PanNE5_25580
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pann02000
]
PanNE5_25580
01504 Antimicrobial resistance genes [BR:
pann01504
]
PanNE5_25580
Transporters [BR:
pann02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
PanNE5_25580
Antimicrobial resistance genes [BR:
pann01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
PanNE5_25580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
BDD93118
LinkDB
All DBs
Position
2830657..2833794
Genome browser
AA seq
1045 aa
AA seq
DB search
MARFFIDRPVFAWVIALLITLVGVLAIRALPVAQYPDIAPPTVSVWSSYPGASAKVVEDA
VTAIIERQMNGAPGLMYTSASSGNGRSSVNLTFRQGTHLDLAAVEVQNRLKTVESRLPEV
VRRDGVVVERAADNIHMVVTLASANPAIGESDLGEIAAAQVINQLKRVPGVGQVQFWGTE
KAIRIWPDTAKLVALDLSASDIVSKIRAYNVRVTVGDIGAGSTPASAPINANVVSEGSLS
SPEAFAGIPLRVRADGSAIRLGDVARVELGAADYAYSSRVDGMPATAMGIKLAAGSNAVA
VMKAVRKVMDEQSALFPAGVSYQIPYETASFVKVSIQKVVKTLLEAVVLVFLVMYLFMQN
LRATLIPTLVVPVALLGTFGVLLGLGYSINTLTMFGMVLAIGILVDDAIVVVENTERIMV
EEGLSPYAATVKAMKQISGAIVGITVVLVAVFVPMAFFPGAVGNIYRQFAITLAVSIAFS
AFLALSLTPALCATLLRPIAAGHHDKRGFFGWFNRTFALGTERYTRTVSKTLRRPWRAVL
VYGAVLIAVPLAFMRLPSSFIPDEDTGSFMVMASEPQGATLPEAMSALERIEQYLMRHEP
VKHVFALGGWNEFGSGPGGGMLFVTLKDWHERTSAHDEVSAIVERVNAKFGGRPDRMVMA
MNSPALPELGSSNGFNLRLQDRAGVGKDALTAARDALLKKAAQDPVLRNVIFAGQGDVPQ
IDVAIDRHKMEALGVKMDDVNTTLATMFGSDYVGDFMLGAESRRVIVQADGRQRVSPEDV
GNLRVRNANGEMVPLSAFVSLKWKLGSPQLRRYNGYPSFTIQGESAPGKSSGEAMVRMER
LMADLPQGIGYEWSGQSLEERISGAQAPVLLALSVLVVFLALAALYESWAIPAAVVMVVP
LGVIGALGAVSLLGMPNDIYFKVGLIATIGLSAKNAILIVEVANDMTKQGMAWLDAAVEA
ARLRLRPIVMTSLAFGFGVVPLAIASGPASGAQRAIGVAVLGGIVTATVLAIFLVPLFFL
WAGRFVRRPKTNASGDAAPAIEGKV
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcttctttatcgatcgcccggtctttgcctgggtgatcgccctgttgattacg
ctcgtcggcgtgctcgcgatccgggcgctccccgttgcgcaataccccgacatcgccccg
ccgacggtcagtgtctggagcagctatccgggcgcgtcggccaaggtggtcgaagacgcc
gtgacggcgatcatcgagcgccagatgaacggcgcgccggggctgatgtatacgtcggcg
tccagcggcaatggtcgttcgtcggtcaatctcaccttccggcagggcacccatctcgat
ctggccgccgtcgaggtgcagaaccgcttgaagacggtcgaatcgcgtctgcctgaagtc
gtgcgccgcgatggcgtcgtcgtcgagcgcgcggccgacaatattcatatggtggtcacg
ctggcgtccgcgaatccggcgattggcgaatccgatctcggcgagatcgccgcggcgcag
gtcatcaaccagctcaaacgcgtgccgggcgtcggacaggtgcagttctggggcacggag
aaagcgattcgtatctggcccgacacagcgaagctcgtcgccctcgacctgagtgcttcg
gacatcgtctcaaagatccgggcctacaacgtgcgcgtaaccgtcggtgatatcggcgca
ggctcgacgcccgcgtcggccccgatcaacgccaacgtggtgtcggaaggctcgctttcc
tcgcccgaagcctttgccgggattccgttgcgcgtgcgtgccgacggctcggcgatccga
ctcggcgatgtcgctcgcgtggaattgggggcggccgattacgcctattcgtcgcgcgtg
gacggcatgccggccaccgcgatgggcatcaagctggccgccggctcgaatgccgtcgcg
gtgatgaaggcggtgcgcaaggtgatggacgaacaatcggcgctgtttccggccggtgtt
tcgtaccagatcccttacgagaccgcgtcgttcgtcaaggtttcgatccagaaggtcgtg
aagacgttgctcgaagccgtggtgctggtgttcctggtgatgtacctgttcatgcagaac
ctgcgcgccacgctcattcccacactggtggtgccggtcgcgctgctcggcaccttcggc
gtgctgctgggactcggctattcgatcaacacgctcacgatgttcggcatggtgctggcc
atcggcattctcgtcgacgacgcgatcgtcgtcgtggagaacaccgaacgcatcatggtg
gaagagggactctcgccctatgccgccacggtcaaggcgatgaagcagatcagcggggcc
atcgtggggatcacggtggtgctggtcgcggtgttcgtgccaatggcgtttttccccggt
gcggtgggcaacatctaccgtcagtttgcaatcacgctcgcggtgtcgattgccttctcg
gcgttccttgccctctcgctcacgcccgcgctgtgcgccacgctgctgcgtccgatcgcg
gccggccatcacgacaaacgcggtttcttcggttggttcaatcggacttttgcgctgggt
accgagcgctacacacggaccgtaagcaagacgttgcgccgtccgtggcgcgcggtgctg
gtgtatggcgcggtgttgatcgccgtgccgctcgcgttcatgcgtctgccctcgtcgttc
attcccgacgaggacaccggcagcttcatggtgatggcgtccgagccgcagggcgccacg
ttgcccgaggcgatgtcggcgctcgagcgcatcgagcaatacctgatgcggcacgagccg
gtcaaacacgtctttgcgctgggcggatggaacgagttcggttcgggcccgggcggcggc
atgctgtttgtcacgctcaaggactggcacgaacgcacatctgcacacgacgaggtgagc
gccattgtcgagcgcgtcaacgccaagtttggcggtcggcccgatcgcatggtgatggcg
atgaacagcccggcgctgccggaactgggttcgtcgaacggcttcaatctgcgcttgcag
gaccgggccggtgtgggtaaggacgcgctcaccgccgcgcgcgatgcgctgctcaagaag
gcggcgcaagatcctgtgctcaggaacgtgatctttgccggtcagggcgacgtgcctcaa
atcgacgtcgccatcgaccggcacaagatggaagcgctcggcgtcaagatggacgacgtc
aatacgacgctcgcgacgatgttcggctccgactatgtcggcgacttcatgctgggcgcg
gagagtcgccgcgtgatcgtgcaagcggacggacgtcagcgcgtgtcgccggaggacgtc
ggcaatctgcgcgtgcgcaacgcgaatggcgaaatggtgccgctttcggcattcgtctcg
ctcaagtggaaactcggctcgccgcagctcaggcgatacaacggttacccctcgttcacg
atccagggcgaatcggcaccgggcaagagcagcggcgaggcgatggtgcgcatggagcga
ctgatggccgacctgccccagggcatcggttacgagtggagcggccagtcgctcgaggag
cgcatctcgggcgcacaggcgccggtgctgctcgccttgtcggtgctggtcgtgttcctc
gcgctcgcggcgttgtacgaaagttgggcaattccggcggccgtcgtcatggtggtgccg
ctcggtgtgatcggggcgctcggcgcggtgagcttgctgggcatgcccaacgacatctac
ttcaaggtggggttgattgcgaccatcggcctgtcggcgaagaacgccatcctgatcgtg
gaagtcgccaacgatatgacgaaacagggcatggcctggctcgatgcggcggtcgaagcc
gcgcgtttgcgcctgcgcccgatcgtgatgacgtcgctggcgttcggcttcggcgtggtg
ccgctggccattgcctcgggcccggcgtcgggcgcgcagcgcgccatcggtgtggcggtg
ctcggcgggatcgtgacggccacggtgctggcgatcttcctggtgccattgtttttcctg
tgggccggccgcttcgtgcgccggccaaagacgaatgcgtcgggcgatgccgcaccggct
atcgaggggaaggtatga
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