Pandoraea sp. NE5: PanNE5_42840
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Entry
PanNE5_42840 CDS
T10412
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
pann Pandoraea sp. NE5
Pathway
pann03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pann00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PanNE5_42840 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pann03400
]
PanNE5_42840 (nth)
Enzymes [BR:
pann01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
PanNE5_42840 (nth)
DNA repair and recombination proteins [BR:
pann03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PanNE5_42840 (nth)
Prokaryotic type
PanNE5_42840 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
Ogg-HhH
EndIII_4Fe-2S
HHH_5
Motif
Other DBs
NCBI-ProteinID:
BDD94844
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All DBs
Position
4791203..4791847
Genome browser
AA seq
214 aa
AA seq
DB search
MNDAKRRALFETLQQLNPHPTTELEYTSPFELLIAVLLSAQATDVSVNKATRKLYAVANT
PAKMLALGEAGVADYIKTIGLYRTKAKNVIATCQLLLDAHGGEVPRSREALETLPGVGRK
TANVVLNTAFGEDTIAVDTHIFRVANRTGLAPGKDPLAVELALERVIPREFKHDAHHWLI
LHGRYVCKARKPECWHCAIEPLCDFRPKTPAPKG
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacgccaaacgacgcgccctgttcgaaacgttgcagcaattgaatccgcacccg
acgacggagctggagtacacgtcgccattcgagttgttgatcgccgtgctgctttcggcc
caggcgaccgacgtctccgtcaacaaggccacacgcaagctctacgcggtggcgaacacc
ccggcgaagatgcttgcgctgggcgaggccggggttgccgattacatcaagacaatcggg
ctgtaccgcaccaaggccaagaacgtcatcgccacctgccagttgctgctcgacgcgcac
ggcggcgaagtgccccgctcgcgcgaagccctcgaaacgctgccgggcgtcggtcgcaag
acggccaatgtggtgctcaataccgcgtttggcgaagacaccattgccgtcgatacgcac
atcttccgcgtggcgaaccgcacgggtctcgcacctggcaaggatccgctggccgtggaa
ctggcgctggagcgcgtcatcccgcgcgagttcaagcacgatgcccaccactggctcatt
ttgcacggccgctatgtgtgcaaggcgcgcaagccggaatgctggcattgcgccatcgag
ccgttgtgcgacttccgtcccaagacgcccgcgccgaagggctga
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