Pandoraea sp. NE5: PanNE5_42970
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Entry
PanNE5_42970 CDS
T10412
Symbol
ubiC
Name
(GenBank) putative chorismate pyruvate-lyase
KO
K03181
chorismate lyase [EC:
4.1.3.40
]
Organism
pann Pandoraea sp. NE5
Pathway
pann00130
Ubiquinone and other terpenoid-quinone biosynthesis
pann01100
Metabolic pathways
pann01110
Biosynthesis of secondary metabolites
pann01240
Biosynthesis of cofactors
Module
pann_M00117
Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol
Brite
KEGG Orthology (KO) [BR:
pann00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
PanNE5_42970 (ubiC)
Enzymes [BR:
pann01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.40 chorismate lyase
PanNE5_42970 (ubiC)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Chor_lyase
Rv2949c-like
UTRA
Glyco_hydro127M
Motif
Other DBs
NCBI-ProteinID:
BDD94857
LinkDB
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Position
complement(4801734..4802342)
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AA seq
202 aa
AA seq
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MTFRFDVGGRRWQAVPAPALSRRHKDWLTRGGALTRHLSTLGRVSVRVVAERVMPADADQ
CRAIGVPLRTPMWARDVILLVDGEPVVVAHSVTPLAYSRSIWQAMRRLRTRPLADLLYHD
PTVTRSMLVSCPLAPRHLLHGRARHDARDPLVGANPRARLWARRSVFVRRGAPLLVTEAF
LPRFWRRLEATHGALAHDGCVS
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgactttccgatttgatgtgggggggcggcgctggcaggctgtcccggcgccggcgctt
tcgcgtcgtcataaagattggcttacccggggcggcgcgctcacgcgccatctgtcgacc
ctggggcgcgtgagcgtgcgcgtcgtggcggagcgagtgatgcccgccgacgcggaccag
tgccgcgccatcggtgtgccattgcgcacgccgatgtgggcccgcgatgtcatcctgctg
gtcgacggcgagccagtggtcgtggcgcacagcgtcacgccgctcgcctatagccgctcg
atctggcaggctatgcgtcgcttgcgtacgcgaccgctggccgatctgctctatcacgat
cccaccgtcacgcggtccatgctggtgtcgtgcccgcttgcgccgcgtcatctgttgcac
ggccgtgcgcgtcatgatgcgcgcgacccgctcgtcggtgcgaacccacgtgcgcggttg
tgggcgcgtcggtcggtcttcgtacgccgtggcgcgccgttgcttgtcaccgaagcgttt
ctgccgcgtttctggcggcgtttggaagcaacgcacggtgcgctggctcacgacggatgc
gtgtcatga
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